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Automatic Methods to Extract New York Heart Association Classification from Clinical Notes.

Rui Zhang1, Sisi Ma2, Liesa Shanahan3

  • 1Institute for Health Informatics, and College of Pharmacy, University of Minnesota, Minneapolis, MN, USA.

Proceedings. IEEE International Conference on Bioinformatics and Biomedicine
|July 24, 2018
PubMed
Summary
This summary is machine-generated.

Natural language processing (NLP) can accurately identify New York Heart Association (NYHA) classification from clinical notes for heart failure patients. This method aids in assessing Cardiac Resynchronization Therapy (CRT) effectiveness.

Keywords:
Clinical NotesElectronic Health RecordsNatural Language ProcessingNew York Heart Association (NYHA)

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Area of Science:

  • Biomedical Informatics
  • Clinical Natural Language Processing
  • Cardiology

Background:

  • Cardiac Resynchronization Therapy (CRT) is a key treatment for heart failure.
  • New York Heart Association (NYHA) classification assesses patient response to CRT.
  • NYHA classification is often missing from structured Electronic Health Record (EHR) data, residing instead in unstructured clinical notes.

Purpose of the Study:

  • To investigate the use of Natural Language Processing (NLP) methods for identifying NYHA classification from clinical notes.
  • To enable consistent, longitudinal tracking of heart failure progression and CRT response assessment.

Main Methods:

  • Collected 6,174 clinical notes.
  • Matched notes with hospital-specific NYHA class diagnosis codes.
  • Evaluated machine-learning (ML) methods, including support vector machine (SVM) with n-gram features, against a rule-based method.

Main Results:

  • Machine-learning methods showed comparable performance to the rule-based method.
  • The best performing method was Support Vector Machine (SVM) with n-gram features, achieving a 93% F-measure.
  • NLP effectively extracts NYHA classification from unstructured clinical text.

Conclusions:

  • NLP methods, particularly SVM with n-gram features, are effective for identifying NYHA classification from clinical notes.
  • This approach can improve the assessment of heart failure progression and CRT effectiveness using EHR data.
  • Further validation of these findings is warranted.