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Crowdsourcing image analysis for plant phenomics to generate ground truth data for machine learning.
Naihui Zhou1,2, Zachary D Siegel3, Scott Zarecor4
1Program in Bioinformatics and Computational Biology, Iowa State University, Ames, Iowa, United States of America.
Crowdsourcing offers a cost-effective solution for generating high-quality ground truth data for machine learning. Amazon MTurk workers achieved expert-level accuracy in corn tassel segmentation, outperforming students.
Area of Science:
- Agricultural Science
- Computer Science
- Data Science
Background:
- High-quality ground truth data is essential for accurate machine learning (ML) model training.
- Professional data annotation is often expensive and time-consuming.
- Crowdsourcing presents a potential solution for scalable and affordable data generation.
Purpose of the Study:
- To evaluate the effectiveness of crowdsourcing for generating ground truth data for an image analysis task.
- To compare the performance of different crowdsourcing groups (students, Amazon MTurk, Master MTurk) in terms of accuracy and speed.
- To assess the quality of crowdsourced data against expert annotations.
Main Methods:
- An image analysis task involving the segmentation of corn tassels was designed.
- Data was collected from students for academic credit, Amazon Mechanical Turk (MTurk) workers, and Master MTurk workers.
- Accuracy, speed, and other quality metrics were analyzed and compared across groups.
Main Results:
- Amazon MTurk and Master MTurk workers significantly outperformed students in segmentation accuracy.
- No significant difference in performance was observed between Amazon MTurk and Master MTurk workers.
- The quality of segmentation by MTurk workers was comparable to that of an expert annotator.
Conclusions:
- Properly managed crowdsourcing can generate large volumes of high-quality ground truth data cost-effectively.
- Crowdsourcing is particularly viable for applications like high-throughput plant phenotyping.
- Best practices for assessing and comparing data quality from different sources were provided.
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