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Updated: Feb 7, 2026

In Vivo Chronic Two-Photon Imaging of Microglia in the Mouse Hippocampus
Published on: July 6, 2022
Colony-Stimulating Factor 1 Receptor (CSF1R) Regulates Microglia Density and Distribution, but Not Microglia
Nynke Oosterhof1, Laura E Kuil1, Herma C van der Linde1
1Department of Clinical Genetics, Erasmus MC, University Medical Center Rotterdam, Wytemaweg 80, 3015 CN Rotterdam, the Netherlands.
Abstract:
Microglia are brain-resident macrophages with trophic and phagocytic functions. Dominant loss-of-function mutations in a key microglia regulator, colony-stimulating factor 1 receptor (CSF1R), cause adult-onset leukoencephalopathy with axonal spheroids and pigmented glia (ALSP), a progressive white matter disorder. Because it remains unclear precisely how CSF1R mutations affect microglia, we generated an allelic series of csf1r mutants in zebrafish to identify csf1r-dependent microglia changes. We found that csf1r mutations led to aberrant microglia density and distribution and regional loss of microglia. The remaining microglia still had a microglia-specific gene expression signature, indicating that they had differentiated normally. Strikingly, we also observed lower microglia numbers and widespread microglia depletion in postmortem brain tissue of ALSP patients. Both in zebrafish and in human disease, local microglia loss also presented in regions without obvious pathology. Together, this implies that CSF1R mainly regulates microglia density and that early loss of microglia may contribute to ALSP pathogenesis.
Insights
Colony-stimulating factor 1 receptor (CSF1R) mutations disrupt microglia density, leading to their loss in the brain. This microglia depletion may contribute to adult-onset leukoencephalopathy with axonal spheroids and pigmented glia (ALSP).
Area of Science:
- Neuroscience
- Immunology
- Genetics
Background:
- Microglia, the brain's resident macrophages, are crucial for neural health.
- Mutations in colony-stimulating factor 1 receptor (CSF1R) cause adult-onset leukoencephalopathy with axonal spheroids and pigmented glia (ALSP), a white matter disorder.
- The precise impact of CSF1R mutations on microglia remains poorly understood.
Purpose of the Study:
- To investigate CSF1R-dependent changes in microglia.
- To elucidate the role of CSF1R in regulating microglia density and distribution.
- To explore the link between microglia loss and ALSP pathogenesis.
Main Methods:
- Generation of an allelic series of csf1r mutants in zebrafish.
- Analysis of microglia density, distribution, and gene expression in zebrafish mutants.
- Examination of microglia numbers in postmortem brain tissue from ALSP patients.
Main Results:
- csf1r mutations in zebrafish resulted in abnormal microglia density, distribution, and regional depletion.
- Remaining microglia in mutants maintained a normal gene expression signature.
- ALSP patients exhibited reduced microglia numbers and widespread depletion, even in unaffected brain regions.
Conclusions:
- CSF1R plays a critical role in regulating microglia density and maintaining their numbers within the brain.
- Loss of microglia, potentially driven by CSF1R dysfunction, may be an early event contributing to ALSP.
- Microglia depletion occurs independently of overt pathology in both zebrafish models and human ALSP.
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