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Related Concept Videos

CRISPR/Cas9 Genome Editing01:28

CRISPR/Cas9 Genome Editing

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The CRISPR-Cas system serves as a bacterial defense mechanism against invading genetic elements such as viruses and plasmids, forming the foundation for its adaptation as a powerful genome-editing tool. Originally discovered in prokaryotes, this system has been repurposed to revolutionize genetic engineering across a wide range of organisms, including plants, animals, and humans. The core component, Cas9, is an endonuclease derived from Streptococcus pyogenes, capable of introducing...
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CRISPR01:59

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Genome editing technologies allow scientists to modify an organism’s DNA via the addition, removal, or rearrangement of genetic material at specific genomic locations. These types of techniques could potentially be used to cure genetic disorders such as hemophilia and sickle cell anemia. One popular and widely used DNA-editing research tool that could lead to safe and effective cures for genetic disorders is the CRISPR-Cas9 system. CRISPR-Cas9 stands for Clustered Regularly Interspaced...
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CRISPR and crRNAs02:53

CRISPR and crRNAs

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Bacteria and archaea are susceptible to viral infections just like eukaryotes; therefore, they have developed a unique adaptive immune system to protect themselves. Clustered regularly interspaced short palindromic repeats and CRISPR-associated proteins (CRISPR-Cas) are present in more than 45% of known bacteria and 90% of known archaea.
The CRISPR-Cas system stores a copy of foreign DNA in the host genome and uses it to identify the foreign DNA upon reinfection. CRISPR-Cas has three different...
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RNA Editing02:23

RNA Editing

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RNA editing is a post-transcriptional modification where a precursor mRNA (pre-mRNA) nucleotide sequence is changed by base insertion, deletion, or modification. The extent of RNA editing varies from a few hundred bases, in mitochondrial DNA of trypanosomes, to a just single base, in nuclear genes of mammals. Even a single base change in the pre-mRNA can convert a codon for one amino acid into the codon for another amino acid or a stop codon. This type of re-coding can significantly affect the...
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Genomics02:02

Genomics

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Genomics is the science of genomes: it is the study of all the genetic material of an organism. In humans, the genome consists of information carried in 23 pairs of chromosomes in the nucleus, as well as mitochondrial DNA. In genomics, both coding and non-coding DNA is sequenced and analyzed. Genomics allows a better understanding of all living things, their evolution, and their diversity. It has a myriad of uses: for example, to build phylogenetic trees, to improve productivity and...
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Uncertainty in Measurement: Accuracy and Precision03:37

Uncertainty in Measurement: Accuracy and Precision

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Scientists typically make repeated measurements of a quantity to ensure the quality of their findings and to evaluate both the precision and the accuracy of their results. Measurements are said to be precise if they yield very similar results when repeated in the same manner. A measurement is considered accurate if it yields a result that is very close to the true or the accepted value. Precise values agree with each other; accurate values agree with a true value. 
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Related Experiment Video

Updated: Feb 6, 2026

CRISPR/Cas9 Ribonucleoprotein-mediated Precise Gene Editing by Tube Electroporation
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Efficient SSA-mediated precise genome editing using CRISPR/Cas9.

Xinyi Li1, Yichun Bai2, Xinzhen Cheng1

  • 1College of Animal Science and Technology, Northwest A&F University, Yangling, China.

The FEBS Journal
|August 8, 2018
PubMed
Summary

This study introduces a novel CRISPR/Cas9 genome editing method using SSA repair for scarless gene editing. This technique achieves high efficiency in precise gene editing and correction at target loci.

Keywords:
CRISPR/Cas9homologous-directed repairseamless genome editingselection cassette deletionsingle-strand annealing

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Area of Science:

  • Molecular Biology
  • Genetics
  • Biotechnology

Background:

  • CRISPR/Cas9 technology enables genome editing but precise, scarless editing remains a challenge.
  • Existing two-step methods like CRISPR/Cas9 with Cre/LoxP or piggyBac transposons have limitations, including residual sequences or uncontrolled integration.
  • The need for efficient and scarless precise genome editing techniques is critical for research and therapeutic applications.

Discussion:

  • This study presents a novel two-step precise genome editing method combining CRISPR/Cas9 with the SSA-mediated repair mechanism.
  • The method utilizes an integrating cassette with selection markers flanked by direct repeat sequences (SSA arms) for seamless editing.
  • Successful application in CCR5 and APP loci demonstrated high precise genome editing efficiencies, up to 45.83% and 68% respectively.

Key Insights:

  • A novel scarless genome editing technique is developed by integrating CRISPR/Cas9 with SSA repair.
  • The method achieves high efficiency in precise gene editing and correction.
  • Demonstrated efficacy in CCR5 and APP loci highlights its potential for various gene editing applications.

Outlook:

  • This technique offers a promising new tool for precise genome editing and gene correction.
  • Further applications in complex genetic modifications and therapeutic gene editing are anticipated.
  • The development of scarless editing methods is crucial for advancing gene therapy and synthetic biology.