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The Fas Signaling Pathway Is a Common Genetic Risk Factor for Severe Cutaneous Drug Adverse Reactions Across Diverse
Heung Woo Park1,2, Sang Heon Kim3, Yoon Seok Chang4
1Department of Internal Medicine, Seoul National University College of Medicine, Seoul, Korea.
Purpose:
Human leukocyte antigen (HLA) has been recognized as the most important genetic risk factor for severe cutaneous adverse drug reactions (SCARs) caused by certain drugs. However, cumulated observations suggest the presence of genetic risk factors for SCARs other than drug-specific HLA. We aimed to identify a common genetic risk factor of SCARs across multiple drugs.
Methods:
We performed 2 independent genome-wide association studies (GWASs). A total of 68 and 38 subjects with a diagnosis of SCAR were enrolled in each GWAS. Their allele frequencies were compared to those of healthy subjects in Korea.
Results:
No single nucleotide polymorphism (SNP) with genome-wide significance was found in either GWAS. We next selected and annotated the 200 top-ranked SNPs from each GWAS. These 2 sets of annotated genes were then entered into the web interface of ConsensusPathDB for a pathway-level analysis. The Fas signaling pathway was significantly over-represented in each gene set from the 2 GWASs.
Conclusions:
Our observations suggest that the Fas signaling pathway may be a common genetic risk factor for SCARs across multiple drugs.
Insights
The Fas signaling pathway may be a common genetic risk factor for severe cutaneous adverse drug reactions (SCARs) across different medications. This study investigated genetic links beyond human leukocyte antigen (HLA) associations.
Area of Science:
- Pharmacogenomics
- Immunogenetics
- Dermatology
Background:
- Human leukocyte antigen (HLA) is a primary genetic risk factor for severe cutaneous adverse drug reactions (SCARs).
- Emerging evidence suggests additional genetic factors contribute to SCARs beyond drug-specific HLA associations.
Purpose of the Study:
- To identify a shared genetic risk factor for SCARs applicable across various drugs.
- To explore genetic predispositions to SCARs independent of known HLA associations.
Main Methods:
- Conducted two independent genome-wide association studies (GWASs) involving SCAR patients and healthy controls in Korea.
- Analyzed top-ranked single nucleotide polymorphisms (SNPs) and performed pathway-level analysis using ConsensusPathDB.
Main Results:
- No single nucleotide polymorphism (SNP) reached genome-wide significance in either GWAS.
- Pathway analysis revealed significant over-representation of the Fas signaling pathway in gene sets from both GWASs.
Conclusions:
- The Fas signaling pathway is implicated as a potential common genetic risk factor for SCARs.
- Findings suggest a broader genetic basis for SCARs involving pathways beyond HLA.
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