Related Experiment Video
Updated: Feb 6, 2026

An Organotypic High Throughput System for Characterization of Drug Sensitivity of Primary Multiple Myeloma Cells
Published on: July 15, 2015
Optimizing drug combinations against multiple myeloma using a quadratic phenotypic optimization platform (QPOP)
Masturah Bte Mohd Abdul Rashid1,2, Tan Boon Toh1, Lissa Hooi1
1Cancer Science Institute of Singapore, Yong Loo Lin School of Medicine, National University of Singapore, Singapore 117599, Singapore.
Abstract:
Multiple myeloma is an incurable hematological malignancy that relies on drug combinations for first and secondary lines of treatment. The inclusion of proteasome inhibitors, such as bortezomib, into these combination regimens has improved median survival. Resistance to bortezomib, however, is a common occurrence that ultimately contributes to treatment failure, and there remains a need to identify improved drug combinations. We developed the quadratic phenotypic optimization platform (QPOP) to optimize treatment combinations selected from a candidate pool of 114 approved drugs. QPOP uses quadratic surfaces to model the biological effects of drug combinations to identify effective drug combinations without reference to molecular mechanisms or predetermined drug synergy data. Applying QPOP to bortezomib-resistant multiple myeloma cell lines determined the drug combinations that collectively optimized treatment efficacy. We found that these combinations acted by reversing the DNA methylation and tumor suppressor silencing that often occur after acquired bortezomib resistance in multiple myeloma. Successive application of QPOP on a xenograft mouse model further optimized the dosages of each drug within a given combination while minimizing overall toxicity in vivo, and application of QPOP to ex vivo multiple myeloma patient samples optimized drug combinations in patient-specific contexts.
Insights
A new platform, quadratic phenotypic optimization platform (QPOP), identifies effective drug combinations for bortezomib-resistant multiple myeloma. QPOP optimizes treatments by reversing epigenetic changes and works in cell lines, mouse models, and patient samples.
Area of Science:
- Hematology
- Oncology
- Pharmacology
- Computational Biology
Background:
- Multiple myeloma is an incurable blood cancer requiring combination drug therapies.
- Proteasome inhibitors like bortezomib have improved survival but resistance is common.
- There is a critical need for novel, effective drug combinations for resistant multiple myeloma.
Purpose of the Study:
- To develop and apply a novel computational platform, QPOP, for optimizing drug combinations against bortezomib-resistant multiple myeloma.
- To identify effective drug combinations that overcome resistance mechanisms.
- To validate QPOP's efficacy in preclinical models and patient-derived samples.
Main Methods:
- Developed the quadratic phenotypic optimization platform (QPOP) to model drug combination effects using quadratic surfaces.
- Applied QPOP to bortezomib-resistant multiple myeloma cell lines to identify optimal drug combinations.
- Validated QPOP-identified combinations in a xenograft mouse model and ex vivo patient samples.
Main Results:
- QPOP identified drug combinations that effectively treated bortezomib-resistant multiple myeloma.
- These combinations were found to reverse DNA methylation and tumor suppressor silencing associated with resistance.
- QPOP successfully optimized drug dosages and minimized toxicity in vivo and personalized treatments for patients.
Conclusions:
- QPOP is a powerful platform for discovering and optimizing drug combinations for complex diseases like multiple myeloma.
- The identified combinations offer a promising strategy to overcome bortezomib resistance.
- QPOP demonstrates potential for personalized medicine by optimizing treatments based on patient-specific contexts.
Related Concept Videos
Optimal Foraging
Optimization Problems
Optimal Arousal Theory
Inverted U-Shaped Performance Curve
The...
Optimizing Chromatographic Separations
Band broadening refers to spreading solute bands as they travel through the column. This broadening can impact resolution. Plate height (H) represents the length required for one theoretical plate. A lower plate height corresponds to...
Unrealistic Optimism Bias
Quadratic Equations

