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Published on: May 18, 2021
Continuous assays for meprin alpha and beta using prolyl tripeptidyl aminopeptidase (PtP) from Porphyromonas
Anja Schulze1, Michael Wermann1, Hans-Ulrich Demuth1
1Fraunhofer Institute for Cell Therapy and Immunology, Department of Drug Design and Target Validation (IZI-MWT), Halle (Saale), Germany.
Abstract:
Common assays for endoprotease activity of meprin α and β are based on cleavage of internally quenched substrates. Although direct and convenient, for meprins these assays bear disadvantages such as, e.g., significant substrate inhibition or potential fluorescence quenching by compounds applied in inhibitor analysis. Here, we present a novel continuous assay by introducing an auxiliary enzyme, prolyl tripeptidyl aminopeptidase (PtP) and the chromogenic substrate KKGYVADAP-p-nitroanilide. We provide a quick strategy for expression and one-step-purification of the auxiliary enzyme. The enzyme kinetic data for meprin α and β suggest hyperbolic v/S-characteristics, the kinetic parameters of substrate conversion by meprin β were Km = 184 ± 32 μM and kcat = 20 ± 4 s-1. We also present conditions for the use of the fluorogenic substrate KKGYVADAP-AMC to assess meprin β activity. The assays were applied for determination of inhibitory parameters of the natural inhibitor actinonin and two recently published hydroxamates. Hence, we present two novel methods, which can be applied to assess inhibitory mechanism and potency with the attractive current drug targets meprin α and β. Furthermore, the assay might also provide implications for analysis of other endoproteases as well as their inhibitors.
Insights
Novel continuous assays for meprin alpha and beta endoprotease activity were developed using an auxiliary enzyme and chromogenic or fluorogenic substrates. These methods overcome limitations of existing assays and enable potent inhibitor analysis.
Area of Science:
- Biochemistry
- Enzymology
Background:
- Current assays for meprin α and β endoprotease activity rely on internally quenched substrates, which have limitations.
- These limitations include significant substrate inhibition and potential fluorescence quenching by inhibitor compounds.
Purpose of the Study:
- To develop novel, continuous assays for meprin α and β endoprotease activity.
- To overcome the disadvantages associated with existing assay methods.
Main Methods:
- A novel continuous assay was established using an auxiliary enzyme, prolyl tripeptidyl aminopeptidase (PtP), and the chromogenic substrate KKGYVADAP-p-nitroanilide.
- The auxiliary enzyme PtP was expressed and purified in a single step.
- Conditions for using the fluorogenic substrate KKGYVADAP-AMC to assess meprin β activity were also established.
Main Results:
- Enzyme kinetic data for meprin α and β exhibited hyperbolic v/S-characteristics.
- Kinetic parameters for meprin β were determined: Km = 184 ± 32 μM and kcat = 20 ± 4 s-1.
- The novel assays were successfully applied to determine inhibitory parameters for actinonin and two hydroxamates.
Conclusions:
- Two novel continuous assay methods for meprin α and β endoprotease activity have been developed.
- These assays facilitate the assessment of inhibitory mechanisms and potency against these drug targets.
- The assay methodology may also be applicable to other endoproteases and their inhibitors.
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