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Published on: October 4, 2024
Circular RNA alterations in the Bombyx mori midgut following B. mori nucleopolyhedrovirus infection
Xiaolong Hu1, Min Zhu1, Bo Liu1
1School of Biology & Basic Medical Science, Soochow University, Suzhou, 215123, China.
Abstract:
Thus far, no systematic studies have examined circRNA expression profiles in the silkworm following B.mori nucleopolyhedrovirus (BmNPV) infection. To explore the expression patterns of circRNAs in the silkworm midgut following BmNPV infection, circRNAs in normal midguts and BmNPV-infected midguts were analyzed by high-throughput sequencing. A total of 353 circRNAs were significantly differentially expressed, of which 241 were upregulated and 112 were downregulated following infection. GO annotation and KEGG pathways analyses of these circRNAs showed that many key immunity pathways and metabolism pathways were enriched in the BmNPV-infected midguts. The potential roles of the predicted targets of the miRNAs that interacted with the circRNAs showed that ubiquitin, apoptosis, and endocytosis signaling pathways were enriched significantly by BmNPV infection.
Insights
This study reveals novel circular RNA (circRNA) expression changes in silkworm midguts after Bombyx mori nucleopolyhedrovirus (BmNPV) infection. Differentially expressed circRNAs are linked to crucial immunity and metabolism pathways, offering insights into host-pathogen interactions.
Area of Science:
- Molecular Biology
- Virology
- Entomology
Background:
- Circular RNAs (circRNAs) are crucial regulatory molecules.
- Their role in silkworm antiviral immunity remains largely unexplored.
- Bombyx mori nucleopolyhedrovirus (BmNPV) poses a significant threat to silkworm production.
Purpose of the Study:
- To investigate circRNA expression profiles in silkworm midguts upon BmNPV infection.
- To identify circRNAs involved in the silkworm's immune response to BmNPV.
- To elucidate the functional implications of circRNA regulation during viral infection.
Main Methods:
- High-throughput sequencing of circRNAs from normal and BmNPV-infected silkworm midguts.
- Bioinformatic analysis including differential expression analysis.
- Gene Ontology (GO) and KEGG pathway enrichment analyses.
Main Results:
- 353 circRNAs were significantly differentially expressed (241 upregulated, 112 downregulated) post-BmNPV infection.
- Enriched pathways included immunity and metabolism.
- Analysis of miRNA targets revealed enrichment in ubiquitin, apoptosis, and endocytosis signaling pathways.
Conclusions:
- BmNPV infection significantly alters circRNA expression in silkworm midguts.
- circRNAs play a role in regulating key immune and metabolic processes during viral infection.
- These findings provide a foundation for understanding circRNA-mediated antiviral defense in silkworms.
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