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Proteomic Characterization of the Heart and Skeletal Muscle Reveals Widespread Arginine ADP-Ribosylation by the ARTC1
Mario Leutert1, Stephan Menzel2, Rickmer Braren2
1Department of Molecular Mechanisms of Disease, University of Zurich, Winterthurerstrasse 190, 8057 Zurich, Switzerland; Molecular Life Science PhD Program of the Life Science Zurich Graduate School, Winterthurerstrasse 190, 8057 Zurich, Switzerland.
Insights
Researchers identified hundreds of new ARTC1 targets in muscle and heart tissues. This ecto-ADP-ribosyltransferase (ARTC1) modifies proteins on the cell surface, impacting muscle function and signal transduction.
Area of Science:
- Biochemistry
- Molecular Biology
- Proteomics
Background:
- The ecto-ADP-ribosyltransferase ARTC1 has a restricted expression in skeletal muscle and heart.
- Identifying ARTC1 targets in vivo and understanding its regulated processes on a proteome level has been challenging.
- Only a limited number of ARTC1-ADP-ribosylated targets were previously known.
Purpose of the Study:
- To identify ARTC1-ADP-ribosylated proteins in skeletal muscle and heart tissue.
- To characterize ARTC1-regulated cellular processes on the proteome level.
- To validate ARTC1 targets and confirm the functional importance of ARTC1-mediated ADP-ribosylation.
Main Methods:
- Application of a newly developed mass spectrometry-based workflow.
- Analysis of C2C12 myotubes, skeletal muscle, and heart tissues from wild-type and ARTC1-deficient mice.
- Proteomic analysis to identify ADP-ribosylated proteins and their modification sites.
Main Results:
- Identification of hundreds of ARTC1-ADP-ribosylated proteins, absent in ARTC1-deficient mice.
- These proteins are modified on arginine residues and primarily located extracellularly or on the cell surface.
- Affected proteins are involved in signal transduction, transmembrane transport, and muscle function.
- Hemopexin (HPX) was validated as a key ARTC1 target, confirming functional significance.
Conclusions:
- The study significantly expands the known targets of ARTC1.
- ARTC1 plays a crucial role in regulating extracellular and cell surface proteins involved in muscle and signaling pathways.
- Extracellular arginine ADP-ribosylation by ARTC1 is functionally important at a systems level.
Abstract:
The clostridium-like ecto-ADP-ribosyltransferase ARTC1 is expressed in a highly restricted manner in skeletal muscle and heart tissue. Although ARTC1 is well studied, the identification of ARTC1 targets in vivo and subsequent characterization of ARTC1-regulated cellular processes on the proteome level have been challenging and only a few ARTC1-ADP-ribosylated targets are known. Applying our recently developed mass spectrometry-based workflow to C2C12 myotubes and to skeletal muscle and heart tissues from wild-type mice, we identify hundreds of ARTC1-ADP-ribosylated proteins whose modifications are absent in the ADP-ribosylome of ARTC1-deficient mice. These proteins are ADP-ribosylated on arginine residues and mainly located on the cell surface or in the extracellular space. They are associated with signal transduction, transmembrane transport, and muscle function. Validation of hemopexin (HPX) as a ARTC1-target protein confirmed the functional importance of ARTC1-mediated extracellular arginine ADP-ribosylation at the systems level.
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