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Epitranscriptomic Code and Its Alterations in Human Disease
Rajashekar Varma Kadumuri1, Sarath Chandra Janga2
1Department of BioHealth Informatics, School of Informatics and Computing, Walker Plaza Building, Indiana University-Purdue University Indianapolis, 719 Indiana Avenue, Suite 319, Indianapolis, IN 46202, USA.
Epitranscriptomics reveals over 160 RNA modifications, acting as signaling switches. New technologies map these marks and their interactions, uncovering the epitranscriptomic code
Area of Science:
- Epitranscriptomics and RNA biology.
Background:
- Over 160 RNA modifications have been identified, with associated "writers," "readers," and "erasers."
- These modifications play crucial roles across diverse RNAs and tissues.
- Integrative approaches are emerging to map modifications and protein-RNA interactions.
Purpose of the Study:
- To explore the role of RNA modifications as signaling switches.
- To investigate the concept of an epitranscriptomic code.
- To highlight the potential of new technologies for mapping epitranscriptomic marks.
Main Methods:
- Transcriptome-wide mapping of RNA modifications.
- Profiling of protein-RNA interactions.
- Leveraging single-molecule sequencing and antibody development.
Main Results:
- RNA modification maps and their crosstalk are beginning to elucidate functional roles.
- The concept of an "epitranscriptomic code" is gaining traction.
- Emerging technologies facilitate detailed mapping of epitranscriptomic marks.
Conclusions:
- RNA modifications function as critical signaling switches.
- An epitranscriptomic code likely influences post-transcriptional RNA fate.
- Advanced sequencing and antibody techniques promise comprehensive charting of epitranscriptomic alterations in health and disease.
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