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Transfer learning by feature-space transformation: A method for Hippocampus segmentation across scanners.
Annegreet van Opbroek1, Hakim C Achterberg1, Meike W Vernooij2
1Biomedical Imaging Group Rotterdam, Department of Medical Informatics and Radiology, Erasmus MC - University Medical Center Rotterdam, 3000, CA, Rotterdam, the Netherlands.
This study introduces a feature-space transformation (FST) to improve magnetic resonance (MR) brain segmentation accuracy across different scanners. The FST method enhances segmentation performance by adapting training data to match target image features, overcoming scanner-induced variations.
Area of Science:
- Medical Imaging
- Neuroimaging
- Computer Vision
Background:
- Supervised voxel classification is a common MR brain segmentation method.
- Performance degrades when training and test data have different acquisition parameters (e.g., scanners).
- Differences in feature representations cause performance deterioration.
Purpose of the Study:
- To propose a feature-space transformation (FST) method.
- To overcome performance degradation in MR brain segmentation due to scanner variability.
- To improve the robustness of segmentation models.
Main Methods:
- Developed a feature-space transformation (FST) using unlabeled images from dual-protocol scans.
- Utilized affine registration to establish a feature-space mapping between source and target voxels.
- Mapped training samples to the feature space of test samples.
Main Results:
- The proposed FST significantly improved hippocampus segmentation performance on datasets with both small and large differences between training and test images.
- FST outperformed methods relying solely on image normalization.
- FST enhanced the performance of a state-of-the-art patch-based-atlas-fusion technique.
Conclusions:
- Feature-space transformation is an effective method to address scanner variability in MR brain segmentation.
- The proposed FST improves segmentation accuracy and robustness.
- This approach offers a valuable solution for multi-center or longitudinal studies using MR imaging.
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