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Small Molecules Co-targeting CKIα and the Transcriptional Kinases CDK7/9 Control AML in Preclinical Models
Waleed Minzel1, Avanthika Venkatachalam1, Avner Fink1
1The Lautenberg Center for Immunology and Cancer Research, Institute of Medical Research Israel-Canada, Hebrew University-Hadassah Medical School, Jerusalem, Israel.
Abstract:
CKIα ablation induces p53 activation, and CKIα degradation underlies the therapeutic effect of lenalidomide in a pre-leukemia syndrome. Here we describe the development of CKIα inhibitors, which co-target the transcriptional kinases CDK7 and CDK9, thereby augmenting CKIα-induced p53 activation and its anti-leukemic activity. Oncogene-driving super-enhancers (SEs) are highly sensitive to CDK7/9 inhibition. We identified multiple newly gained SEs in primary mouse acute myeloid leukemia (AML) cells and demonstrate that the inhibitors abolish many SEs and preferentially suppress the transcription elongation of SE-driven oncogenes. We show that blocking CKIα together with CDK7 and/or CDK9 synergistically stabilize p53, deprive leukemia cells of survival and proliferation-maintaining SE-driven oncogenes, and induce apoptosis. Leukemia progenitors are selectively eliminated by the inhibitors, explaining their therapeutic efficacy with preserved hematopoiesis and leukemia cure potential; they eradicate leukemia in MLL-AF9 and Tet2-/-;Flt3ITD AML mouse models and in several patient-derived AML xenograft models, supporting their potential efficacy in curing human leukemia.
Insights
New inhibitors targeting casein kinase I alpha (CKIα), CDK7, and CDK9 activate p53 and suppress leukemia by targeting super-enhancers. These agents show promise for curing acute myeloid leukemia (AML) while preserving normal blood cell development.
Area of Science:
- Oncology
- Molecular Biology
- Drug Development
Background:
- Casein kinase I alpha (CKIα) ablation activates p53, and its degradation is key to lenalidomide's efficacy in pre-leukemia.
- Acute myeloid leukemia (AML) is driven by oncogenes regulated by super-enhancers (SEs).
Purpose of the Study:
- To develop novel inhibitors targeting CKIα, CDK7, and CDK9 for enhanced anti-leukemic activity.
- To investigate the mechanism of action of these inhibitors on SEs and p53 activation in AML.
Main Methods:
- Development of dual inhibitors targeting CKIα and transcriptional kinases CDK7/9.
- Analysis of SEs in primary mouse AML cells and patient-derived xenografts.
- Assessment of p53 stabilization, gene transcription suppression, and apoptosis induction.
- Evaluation of therapeutic efficacy in AML mouse models and xenografts.
Main Results:
- The developed inhibitors co-target CKIα, CDK7, and CDK9, augmenting p53 activation.
- Inhibitors abolish newly gained SEs in AML cells and suppress SE-driven oncogene transcription.
- Combined inhibition synergistically stabilizes p53, induces apoptosis, and selectively eliminates leukemia progenitors.
- Therapeutic efficacy demonstrated in multiple AML models, including MLL-AF9 and patient-derived xenografts.
Conclusions:
- Dual CKIα/CDK7/9 inhibition represents a promising therapeutic strategy for AML.
- The inhibitors selectively target leukemia cells by disrupting SE-driven oncogene addiction.
- This approach offers potential for leukemia cure with preserved hematopoiesis.
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