Related Experiment Video
Updated: Feb 5, 2026

Separation and Fractionation of Culture Filtrate Proteins (CFPs) from Mycobacterium tuberculosis
Published on: July 11, 2025
VapC proteins from Mycobacterium tuberculosis share ribonuclease sequence specificity but differ in regulation and
Abigail Sharrock1, Alaine Ruthe1, Emma S V Andrews1
1School of Science, University of Waikato, Hamilton, New Zealand.
Abstract:
The chromosome of Mycobacterium tuberculosis (Mtb) contains a large number of Type II toxin-antitoxin (TA) systems. The majority of these belong to the VapBC TA family, characterised by the VapC protein consisting of a PIN domain with four conserved acidic residues, and proposed ribonuclease activity. Characterisation of five VapC (VapC1, 19, 27, 29 and 39) proteins from various regions of the Mtb chromosome using a combination of pentaprobe RNA sequences and mass spectrometry revealed a shared ribonuclease sequence-specificity with a preference for UAGG sequences. The TA complex VapBC29 is auto-regulatory and interacts with inverted repeat sequences in the vapBC29 promoter, whereas complexes VapBC1 and VapBC27 display no auto-regulatory properties. The difference in regulation could be due to the different properties of the VapB proteins, all of which belong to different VapB protein families. Regulation of the vapBC29 operon is specific, no cross-talk among Type II TA systems was observed. VapC29 is bacteriostatic when expressed in Mycobacterium smegmatis, whereas VapC1 and VapC27 displayed no toxicity upon expression in M. smegmatis. The shared sequence specificity of the five VapC proteins characterised is intriguing, we propose that the differences observed in regulation and toxicity is the key to understanding the role of these TA systems in the growth and persistence of Mtb.
Insights
Mycobacterium tuberculosis toxin-antitoxin systems, particularly VapBC, share ribonuclease activity targeting UAGG sequences. Differences in regulation and toxicity among VapC proteins may explain their role in Mtb growth and persistence.
Area of Science:
- Microbiology
- Molecular Biology
- Genetics
Background:
- Mycobacterium tuberculosis (Mtb) harbors numerous Type II toxin-antitoxin (TA) systems.
- The VapBC family, characterized by VapC proteins with PIN domains and ribonuclease activity, is prevalent in Mtb.
Purpose of the Study:
- To characterize the ribonuclease activity, regulation, and toxicity of five VapC proteins from Mtb.
- To investigate the role of VapBC TA systems in Mtb growth and persistence.
Main Methods:
- Characterization of five VapC proteins using pentaprobe RNA sequences and mass spectrometry.
- Analysis of auto-regulation and promoter interactions for VapBC29, VapBC1, and VapBC27.
- Expression of VapC proteins in Mycobacterium smegmatis to assess toxicity.
Main Results:
- Five Mtb VapC proteins exhibited shared ribonuclease specificity for UAGG sequences.
- VapBC29 demonstrated auto-regulation, while VapBC1 and VapBC27 did not, potentially due to distinct VapB protein properties.
- VapC29 was bacteriostatic in M. smegmatis, whereas VapC1 and VapC27 showed no toxicity.
- Specific regulation of the vapBC29 operon without cross-talk among Type II TA systems was observed.
Conclusions:
- The conserved UAGG sequence specificity of VapC proteins is notable.
- Variations in auto-regulation and toxicity among VapBC systems are crucial for understanding their function in Mtb survival and persistence.
- Further research into these regulatory differences is warranted.
More Related Videos
Related Concept Videos
Regulated Protein Degradation
Protein degradation plays two important roles in the cells. It helps to protect cells from misfolded or damaged proteins before they lead to a...
Regulated Protein Degradation
Covalently Linked Protein Regulators
These groups modify specific amino acids in a protein....
Epigenetic Regulation
Master Transcription Regulators
Cis-regulatory Sequences

