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OpenCLIPER: An OpenCL-Based C++ Framework for Overhead-Reduced Medical Image Processing and Reconstruction on
IEEE Journal of Biomedical and Health Informatics
|September 13, 2018
Summary
This study introduces an OpenCL-based framework simplifying the use of dedicated computing devices for medical image processing. It automates complex tasks, allowing developers to focus on algorithm development and boosting efficiency.
Area of Science:
- Medical Image Processing
- High-Performance Computing
- Software Engineering
Background:
- Medical image processing algorithms face computational cost limitations.
- Dedicated hardware like Graphics Processing Units (GPUs) offer speedups but require complex management.
- Developers often struggle with housekeeping tasks (device management, data transfer, synchronization) when using accelerators.
Purpose of the Study:
- To present an OpenCL-based framework for seamless integration of dedicated computing devices in medical image processing.
- To enable developers to concentrate on image processing tasks rather than device management.
- To abstract away complexities of device selection, initialization, data handling, and kernel compilation.
Main Methods:
- Developed an OpenCL-based framework automating device discovery, initialization, and data transfers.
- Implemented a system where data structures are defined once, independent of the computing device.
- Utilized pinned memory/buffer mapping for optimized data transfer performance.
- Designed algorithms as chained mathematical operators (processes) with split initialization and core workloads.
Main Results:
- The framework significantly reduces the code required for device management and kernel compilation.
- Developers can utilize computing devices almost immediately and effortlessly.
- Algorithm code becomes independent of the target device type (CPU or GPU).
- Processes can split initialization from core workload, avoiding performance penalties in chains and loops.
Conclusions:
- The proposed framework streamlines the use of dedicated computing devices for medical image processing.
- It enhances developer productivity by minimizing overhead associated with hardware acceleration.
- The approach facilitates efficient and portable medical image analysis on diverse hardware platforms.
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