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Preparation and Delivery of Protein Microcrystals in Lipidic Cubic Phase for Serial Femtosecond Crystallography
Published on: September 20, 2016
Solving protein structure from sparse serial microcrystal diffraction data at a storage-ring synchrotron source
Ti-Yen Lan1, Jennifer L Wierman2,3, Mark W Tate1
1Laboratory of Atomic and Solid State Physics, Cornell University, Ithaca, NY 14853, USA.
A new expand-maximize-compress (EMC) algorithm solves protein structures from weak X-ray diffraction data, enabling serial microcrystallography with smaller crystals and reducing sample waste.
Area of Science:
- Structural Biology
- Biophysics
- Crystallography
Background:
- Serial microcrystallography (SMC) at synchrotron sources faces challenges with small crystals due to radiation damage and weak diffraction.
- Conventional indexing methods often fail for small crystals, leading to data loss.
Purpose of the Study:
- To introduce and validate a novel method, the expand-maximize-compress (EMC) algorithm, for analyzing weak diffraction data in SMC.
- To enable structure determination from data frames typically discarded by standard indexing software.
Main Methods:
- Development and application of the expand-maximize-compress (EMC) algorithm.
- Testing the EMC algorithm on a serial microcrystallography dataset with weak diffraction signals and significant background scatter.
Main Results:
- Successfully solved a protein structure at 2.1 Å resolution using the EMC algorithm on weak data.
- Demonstrated the algorithm's effectiveness despite challenging background noise from the sample delivery medium.
Conclusions:
- The EMC algorithm enhances serial microcrystallography by enabling analysis of weak diffraction data from small crystals.
- This method reduces sample consumption and expands the feasibility of SMC at storage-ring sources.
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