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Updated: Feb 5, 2026

Crystallizing Membrane Proteins for Structure Determination using Lipidic Mesophases
Published on: November 21, 2010
Crystal structure and Hirshfeld surface analysis of (2
T N Sanjeeva Murthy1, Zeliha Atioğlu2, Mehmet Akkurt3
1Department of Chemistry, Sri Siddhartha Academy of Higher Education, Tumkur 572 107, Karnataka, India.
This study details the molecular structure of a novel compound featuring dichloro-thiophene and dichlorophenyl rings. Crystal analysis reveals specific intermolecular interactions, including pi-stacking and various atom-pair contacts, influencing its solid-state arrangement.
Area of Science:
- Crystallography
- Materials Science
- Organic Chemistry
Background:
- Understanding molecular structure and intermolecular interactions is crucial for predicting material properties.
- Halogenated organic compounds often exhibit unique electronic and structural characteristics.
Purpose of the Study:
- To elucidate the detailed molecular structure of the title compound (C13H6Cl4OS).
- To analyze the intermolecular interactions and crystal packing of the compound.
- To investigate the conformational preferences and stabilizing forces within the molecule.
Main Methods:
- Single-crystal X-ray diffraction was employed to determine the molecular structure.
- Hirshfield surface analysis was utilized to quantify intermolecular interactions.
- Conformational analysis was performed to identify stabilizing motifs.
Main Results:
- The molecular structure comprises 2,5-dichloro-thiophene and 2,4-dichlorophenyl rings linked by a prop-2-en-1-one spacer.
- A small dihedral angle (12.24°) between the aromatic rings and an E configuration about the C=C bond were observed.
- Intramolecular C-H⋯Cl contacts stabilize the molecular conformation, forming S(6) and S(5) ring motifs.
- Crystal packing is characterized by face-to-face π-stacking and significant intermolecular contacts, notably Cl⋯H/H⋯Cl and Cl⋯Cl.
Conclusions:
- The study provides a comprehensive structural characterization of the title compound.
- Intermolecular interactions, particularly π-stacking and halogen bonding, play a significant role in the crystal architecture.
- The findings contribute to the understanding of structure-property relationships in halogenated organic molecules.
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