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Updated: Feb 5, 2026

Processing the Loblolly Pine PtGen2 cDNA Microarray
Published on: March 20, 2009
[Microscopic and molecular identification of pine needles]
Hengpei Gong1, Zuwang Liu1, Yanyue Chen1
1College of Pharmaceutical Sciences, Zhejiang Chinese Medical University, Hangzhou 310053, China.
Microscopic and molecular methods accurately distinguish pine needles from different species. The rbcL DNA marker effectively differentiates Pinus species, aiding in quality evaluation and classification.
Area of Science:
- Botany
- Molecular Biology
- Genetics
Background:
- Accurate identification of plant species is crucial for quality control and classification.
- Pine needles are used in traditional medicine and industry, necessitating reliable identification methods.
Purpose of the Study:
- To differentiate pine needles from various origins using microscopic and molecular techniques.
- To evaluate the effectiveness of specific DNA markers for pine species identification.
Main Methods:
- Morphological and microscopic examination of pine needles from three Pinus species.
- DNA extraction, PCR amplification, and sequencing of ITS2 and rbcL regions.
- Phylogenetic analysis using Kimura-2-Parameter distances and neighbor-joining (NJ) method.
Main Results:
- Significant morphological and microscopic differences were observed among the three pine needle types.
- The rbcL DNA marker demonstrated clear separation between intraspecific and interspecific genetic distances.
- NJ tree analysis based on rbcL successfully clustered the three pine needle species distinctly.
Conclusions:
- Microscopic and molecular identification provides accurate and rapid differentiation of pine needles.
- The rbcL marker is a reliable DNA barcode for distinguishing Pinus species.
- This study establishes a basis for quality assessment and classification of pine needles.
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