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Updated: Feb 5, 2026

Determination of the Gas-phase Acidities of Oligopeptides
Published on: June 24, 2013
Conformational Effects on Gas-Phase Acidities of Isomeric C3 and C5 Alkanols
Surja B Ghale1, Jerry G Lanorio1, Alex A Nickel1
1Department of Chemistry , University of Nevada, Reno , 1664 N. Virginia Street , MS 216, Reno , Nevada 89557-0216 , United States.
Abstract:
The competitive threshold collision-induced dissociation technique is used to examine conformational effects on the relative gas-phase acidities of selected alcohols. By use of HF and H2O as reference acids in a local thermochemical network to obtain absolute acidities, the measured 0 K gas-phase acidities for the propanol and pentanol isomers are Δacid H0(CH3CH2CH2O-H) = 1563.9 ± 2.9 kJ/mol, Δacid H0((CH3)2CHO-H) = 1568.2 ± 2.7 kJ/mol, Δacid H0(CH3(CH2)4O-H) = 1556.4 ± 2.9 kJ/mol, and Δacid H0((CH3)2CHCH2CH2O-H) = 1556.5 ± 3.0 kJ/mol. Conformational stabilization during deprotonation results in the observed acidity differences between isomers, which can be compared with the "intrinsic" acidity strength defined as deprotonation of the extended all- anti staggered conformations without relaxation. The intrinsic acidities for the propanol and pentanol isomers are 1567 and 1562 kJ/mol, respectively. The difference in intrinsic and observed acidity is largely due to the result of a twisted geometry of the alkoxide ion, stabilized by electrostatic interaction between the electronegative terminal O atom and a H atom on the γ-carbon. These interactions are primarily due to internal rotation about the Cα-Cβ bonds for n-propoxide and the primary pentoxides.
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