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Published on: August 5, 2018
Early postmortem interval estimation based on Cdc25b mRNA in rat cardiac tissue
Li Tao1, Jianlong Ma2, Liujun Han1
1Department of Forensic Medicine, School of Basic Medical Sciences, Fudan University, 131Dongan Road, Shanghai 200032, China.
Purpose:
The postmortem interval (PMI) is the amount of time that has elapsed since the time of death. Over the years, many approaches have been developed to assess PMI, but their time frame of applicability has been only days to weeks. Our present pilot study aimed to find the sensitive mRNA marker if the degradation of mRNA could be used to estimate the early postmortem interval (up to 24 h).
Methods:
In our study, we use the microarray to screen 217 mRNAs markers of rat cardiac tissue. Then, real-time fluorescent quantitative PCR (qPCR) was used to validate of the candidate markers at 7 time points within 24 h and at temperatures of 25 °C and 35 °C. Another 27 rats were then used to verify the model.
Results:
Among all of the candidate markers, △Cq (cell division cycle 25 homolog B(Cdc25b)) had the best correlation coefficient with early postmortem interval and was used to build a new model using the R software. The results of verification testing demonstrated that the error rate was less than 15%, demonstrating the high predictive power of our mathematical model.
Conclusion:
In this study, Cdc25b was found to be the sensitive marker to estimate early postmortem interval, and Rpl27 was found to be suitable for use as the endogenous control. Our work provided new leads for molecular approaches to early postmortem interval estimation using the significant mRNA markers established here.
Insights
This study identifies cell division cycle 25 homolog B (Cdc25b) as a sensitive mRNA marker for estimating early postmortem intervals up to 24 hours. This molecular approach offers improved accuracy for determining time since death in forensic investigations.
Area of Science:
- Forensic Science
- Molecular Biology
- Biochemistry
Background:
- Accurate postmortem interval (PMI) estimation is crucial in forensic investigations.
- Current methods for PMI assessment are limited to days to weeks.
- There is a need for reliable molecular markers to determine early PMI (within 24 hours).
Purpose of the Study:
- To identify sensitive mRNA markers for estimating early postmortem intervals (up to 24 hours).
- To investigate the potential of mRNA degradation as an indicator of early PMI.
- To develop a predictive model for early PMI estimation using molecular markers.
Main Methods:
- Screening of 217 mRNA markers in rat cardiac tissue using microarrays.
- Validation of candidate markers using real-time quantitative PCR (qPCR) at various time points and temperatures.
- Development and verification of a mathematical model for PMI estimation using R software.
Main Results:
- Cell division cycle 25 homolog B (Cdc25b) demonstrated the strongest correlation with early PMI.
- A predictive model based on Cdc25b achieved an error rate of less than 15%.
- Rpl27 was identified as a suitable endogenous control for normalization.
Conclusions:
- Cdc25b is a sensitive molecular marker for estimating early postmortem intervals.
- The developed mathematical model shows high predictive power for early PMI.
- This study provides novel molecular approaches for early PMI estimation using mRNA markers.
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