Scalable Multiplexed Drug-Combination Screening Platforms Using 3D Microtumor Model for Precision Medicine
Zhixiong Zhang1, Yu-Chih Chen1,2, Sumithra Urs3
1Department of Electrical Engineering and Computer Science, University of Michigan, 1301 Beal Avenue, Ann Arbor, MI, 48109-2122, USA.
Abstract:
Cancer heterogeneity is a notorious hallmark of this disease, and it is desirable to tailor effective treatments for each individual patient. Drug combinations have been widely accepted in cancer treatment for better therapeutic efficacy as compared to a single compound. However, experimental complexity and cost grow exponentially with more target compounds under investigation. The primary challenge remains to efficiently perform a large-scale drug combination screening using a small number of patient primary samples for testing. Here, a scalable, easy-to-use, high-throughput drug combination screening scheme is reported, which has the potential of screening all possible pairwise drug combinations for arbitrary number of drugs with multiple logarithmic mixing ratios. A "Christmas tree mixer" structure is introduced to generate a logarithmic concentration mixing ratio between drug pairs, providing a large drug concentration range for screening. A three-layer structure design and special inlets arrangement facilitate simple drug loading process. As a proof of concept, an 8-drug combination chip is implemented, which is capable of screening 172 different treatment conditions over 1032 3D cancer spheroids on a single chip. Using both cancer cell lines and patient-derived cancer cells, effective drug combination screening is demonstrated for precision medicine.
Insights
This study presents a novel, high-throughput drug combination screening method for cancer. The scalable platform efficiently tests numerous drug combinations on patient cells, advancing precision medicine.
Area of Science:
- Oncology
- Biotechnology
- Pharmacology
Background:
- Cancer heterogeneity necessitates personalized treatment strategies.
- Drug combinations offer enhanced efficacy over single agents but pose screening challenges.
- Current methods for large-scale drug combination screening are complex and costly, especially with limited patient samples.
Purpose of the Study:
- To develop a scalable, high-throughput drug combination screening scheme for cancer.
- To enable efficient testing of numerous pairwise drug combinations with logarithmic concentration ratios.
- To facilitate precision medicine by screening drug combinations on patient-derived cancer cells.
Main Methods:
- Introduction of a "Christmas tree mixer" structure for logarithmic drug concentration ratios.
- Utilization of a three-layer chip design with specialized inlets for simplified drug loading.
- Implementation of an 8-drug combination chip capable of screening 172 conditions across 1032 3D cancer spheroids.
Main Results:
- Demonstrated a scalable and user-friendly high-throughput drug combination screening platform.
- Successfully screened multiple drug combinations on both cancer cell lines and patient-derived cells.
- Validated the potential for comprehensive pairwise drug combination screening with logarithmic mixing ratios.
Conclusions:
- The developed screening scheme significantly reduces experimental complexity and cost for drug combination studies.
- This platform supports precision medicine by enabling efficient and personalized drug combination testing.
- The technology holds promise for accelerating the discovery of effective cancer combination therapies.
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