A Combined In Vitro/In Silico Approach to Identifying Off-Target Receptor Toxicity

Joseph Leedale1, Kieran J Sharkey1, Helen E Colley2

  • 1EPSRC Liverpool Centre for Mathematics in Healthcare, Department of Mathematical Sciences, University of Liverpool, Liverpool L69 7ZL, UK.

Iscience
|September 22, 2018
PubMed

Insights

This study presents an integrated in vitro/in silico method to predict chemical toxicity by analyzing off-target receptor binding and transcription factor dysregulation, reducing animal testing.

Area of Science:

  • Toxicology and computational chemistry
  • Pharmacology and molecular biology

Background:

  • Xenobiotics can cause toxicity by binding to unintended receptors, disrupting transcription factors.
  • Current methods for identifying chemical toxicity often rely on extensive animal testing.

Purpose of the Study:

  • To develop an integrated in vitro/in silico approach for predicting toxicological responses from off-target receptor binding.
  • To refine in vitro receptor identification and minimize the need for in vivo studies.

Main Methods:

  • Utilizing mathematical modeling to mechanistically describe transcriptional activity post-receptor-ligand binding.
  • Employing transcription factor signaling assays to inform the mathematical models.
  • Identifying critical reactions within signaling cascades to pinpoint potential intervention points.
  • Integrating physiologically based pharmacokinetic (PBPK) modeling to predict whole-body toxic potential.

Main Results:

  • The developed methodology successfully models the mechanistic links between receptor-ligand binding and downstream transcriptional changes.
  • Identification of key regulatory points in signaling pathways allows for optimized in vitro testing strategies.
  • PBPK modeling provides crucial temporal and spatial information on receptor activation, enhancing toxicity predictions.

Conclusions:

  • The integrated in vitro/in silico approach offers a viable alternative to traditional animal testing for predicting chemical toxicity.
  • This strategy refines the understanding of off-target effects and improves the efficiency of toxicological assessments.
  • The methodology aids in identifying potential hazards early in chemical development, reducing risks and resource utilization.

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