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Updated: Feb 4, 2026

Molecular Evolution of the Tre Recombinase
Published on: May 29, 2008
Anomalous percolation features in molecular evolution
P Zimmer1, K Kruse2, J Nagler3
1Theoretical Physics, Saarland University, P.O. Box 151150, 66041 Saarbrücken, Germany.
This study revisits a model of molecular evolution, finding anomalous percolation features in self-replicating molecules. The research highlights competition between ligation and autocatalysis in the emergence of molecular life.
Area of Science:
- Origin of Life Studies
- Chemical Kinetics
- Statistical Physics
Background:
- Self-replication is fundamental to all life, requiring autocatalysis for molecular origins.
- Previous models explored molecular evolution with competing ligation and autocatalysis.
Purpose of the Study:
- To re-examine a model of molecular evolution involving self-replicating molecules.
- To investigate the transition from small molecules to macromolecules via irreversible aggregation.
- To identify anomalous percolation phenomena within this model.
Main Methods:
- Revisiting a previously established model of molecular evolution.
- Analyzing the competition between spontaneous ligation and autocatalysis for molecular building blocks.
- Studying irreversible aggregation and its impact on molecular size distribution.
Main Results:
- Observed an array of anomalous percolation features.
- Identified a transition from small molecules to macromolecules driven by aggregation.
- Found phenomena consistent with predictions for specific percolation processes.
Conclusions:
- The model exhibits complex percolation behavior during molecular evolution.
- Anomalous percolation features emerge from the interplay of aggregation and self-replication.
- This work contributes to understanding the physical basis of molecular self-organization.
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