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Updated: Feb 4, 2026

Fast Grid Preparation for Time-Resolved Cryo-Electron Microscopy
Published on: November 6, 2021
Calibration of Multi-Parameter Models of Avascular Tumor Growth Using Time Resolved Microscopy Data.
E A B F Lima1, N Ghousifam2, A Ozkan2
1Institute for Computational Engineering and Sciences, The University of Texas at Austin, Austin, 78712, USA. lima@ices.utexas.edu.
This study introduces a novel experimental and computational approach to accurately calibrate mathematical tumor growth models. It addresses challenges in predicting tumor development by systematically quantifying cell death and growth rates.
Area of Science:
- Mathematical Biology
- Computational Oncology
- Biophysics
Background:
- Mathematical models are crucial for predicting tumor spatiotemporal development.
- Challenges include limited data for parameter calibration and quantifying experimental/modeling uncertainties.
Purpose of the Study:
- To systematically calibrate parameters (apoptosis, proliferation, necrosis, mobility) in a phase-field tumor growth model.
- To quantify uncertainties in model parameters using a Bayesian framework.
- To develop a generalizable experiment-computational approach for multi-parameter model calibration.
Main Methods:
- Designed a sequence of in vitro experiments with increasing complexity.
- Characterized human liver carcinoma cell behavior under varying conditions (cell concentration, nutrients, treatment).
- Employed a Bayesian framework for uncertainty quantification of model parameters.
Main Results:
- Achieved average differences between 11.54%-14.04% for apoptosis, 7.33%-23.30% for proliferation, and 8.12%-31.55% for necrosis experiments.
- Demonstrated accurate estimations of proliferation, apoptosis, and necrosis rates.
- Validated the generalizability of the proposed approach for multi-parameter models.
Conclusions:
- The presented experiment-computational strategy effectively calibrates phase-field tumor growth models.
- Accurate parameter estimation is achievable through systematic, multi-stage experimental design.
- This approach enhances the reliability of mathematical models in cancer research.
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