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Updated: Feb 4, 2026

Measurements of Physiological Stress Responses in C. Elegans
Published on: May 21, 2020
New insights into the cellular temporal response to proteostatic stress
Justin Rendleman1, Zhe Cheng1, Shuvadeep Maity1
1Center for Genomics and Systems Biology, Department of Biology, New York University, New York, United States.
Abstract:
Maintaining a healthy proteome involves all layers of gene expression regulation. By quantifying temporal changes of the transcriptome, translatome, proteome, and RNA-protein interactome in cervical cancer cells, we systematically characterize the molecular landscape in response to proteostatic challenges. We identify shared and specific responses to misfolded proteins and to oxidative stress, two conditions that are tightly linked. We reveal new aspects of the unfolded protein response, including many genes that escape global translation shutdown. A subset of these genes supports rerouting of energy production in the mitochondria. We also find that many genes change at multiple levels, in either the same or opposing directions, and at different time points. We highlight a variety of putative regulatory pathways, including the stress-dependent alternative splicing of aminoacyl-tRNA synthetases, and protein-RNA binding within the 3' untranslated region of molecular chaperones. These results illustrate the potential of this information-rich resource.
Insights
This study reveals how cervical cancer cells respond to proteostatic challenges by analyzing gene expression at multiple levels. It uncovers new details about the unfolded protein response and identifies key regulatory pathways involved in cellular stress.
Area of Science:
- Molecular Biology
- Cell Biology
- Biochemistry
Background:
- Maintaining proteostasis is crucial for cellular health and involves complex gene expression regulation.
- Proteostatic challenges, such as misfolded proteins and oxidative stress, significantly impact cellular function.
- Understanding these responses is vital for cancer research and therapeutic development.
Purpose of the Study:
- To systematically characterize the molecular landscape of cervical cancer cells under proteostatic stress.
- To identify shared and specific cellular responses to misfolded proteins and oxidative stress.
- To uncover novel regulatory pathways involved in proteome maintenance.
Main Methods:
- Quantification of temporal changes in transcriptome, translatome, proteome, and RNA-protein interactome.
- Analysis of cervical cancer cells subjected to proteostatic challenges.
- Investigation of gene expression regulation at multiple molecular layers.
Main Results:
- Identified shared and distinct molecular responses to misfolded proteins and oxidative stress.
- Revealed new aspects of the unfolded protein response, including genes that bypass translation shutdown.
- Discovered stress-dependent alternative splicing and altered protein-RNA binding in regulatory pathways.
- Observed multi-level gene expression changes occurring at different times and directions.
Conclusions:
- Cervical cancer cells exhibit complex, multi-layered responses to proteostatic challenges.
- The unfolded protein response involves intricate regulatory mechanisms impacting cellular energy production.
- This study provides a rich resource for understanding proteome maintenance and identifying potential therapeutic targets.
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