Related Experiment Video
Updated: Feb 4, 2026

11:07
High-resolution Optical Mapping of the Mouse Sino-atrial Node
Published on: December 2, 2016
16.8K
Chromosome 4q25 Variant rs6817105 Bring Sinus Node Dysfunction and Left Atrial Enlargement
Shunsuke Tomomori1, Yukiko Nakano2, Hidenori Ochi3
1Department of Cardiovascular Medicine, Hiroshima University Graduate School of Biomedical and Health Sciences, Hiroshima, Japan.
Scientific Reports
|October 3, 2018
Summary
The rs6817105 single nucleotide polymorphism (SNP) is strongly linked to atrial fibrillation (AF). This SNP is associated with impaired sinus node function and enlarged left atrium in AF patients.
Area of Science:
- Genetics
- Cardiology
- Molecular Biology
Background:
- Genome-wide association studies identified a strong link between the rs6817105 SNP and atrial fibrillation (AF).
- Phenotypic consequences of the rs6817105 SNP, particularly in relation to AF, remain largely undescribed.
- MicroRNAs (miRNAs) are implicated in atrial remodeling and AF pathogenesis.
Purpose of the Study:
- To investigate the phenotypic alterations associated with the rs6817105 SNP in atrial fibrillation patients.
- To examine the relationship between rs6817105 genotype and clinical, echocardiographic, and electrophysiological parameters.
- To explore potential links between rs6817105 genotype and serum miRNA concentrations.
Main Methods:
- Genotyping of the rs6817105 SNP in 574 AF patients and 1,554 non-AF controls.
- Analysis of clinical characteristics, echocardiographic parameters (e.g., left atrial volume index), and electrophysiological parameters (e.g., corrected sinus node recovery time).
- Quantification of serum miRNA concentrations for 2555 miRNAs in relation to rs6817105 genotype.
Main Results:
- The minor allele frequency of rs6817105 was significantly higher in AF patients (66%) compared to controls (47%), with a strong association (odds ratio 2.12, p < 10^-26).
- AF patients carrying the minor allele of rs6817105 exhibited longer corrected sinus node recovery time (CSRT) (p=0.001) and larger left atrial volume index (LAVI) (p=0.030).
- No significant associations were found between rs6817105 genotype and serum miRNA concentrations.
Conclusions:
- The rs6817105 minor allele is strongly implicated in sinus node dysfunction.
- Left atrial enlargement is associated with the rs6817105 minor allele in the context of AF.
- The rs6817105 SNP influences AF pathophysiology through mechanisms potentially independent of circulating miRNA levels.
Related Concept Videos
Histone Variants at the Centromere
5.1K
Histone variants are the histone proteins with structural and sequence variations. These variants may be regarded as “mutant” forms that replace their canonical histone counterparts in the nucleosomes. Specific post-translational modifications on the histone variants enable further chromatin complexity and regulate tissue-specific gene expression. The most common histone variants are from histone H2A, H2B, and linker histone H1 families. However, several variants of histone H3...
5.1K
Chromosome Structure
26.5K
A functional eukaryotic chromosome must contain three elements: a centromere, telomeres, and numerous origins of replication.
The centromere is a DNA sequence that links sister chromatids. This is also where kinetochores, protein complexes to which spindle microtubules attach, are constructed after the chromosome is replicated. The kinetochores allow the spindle microtubules to move the chromosomes within the cell during cell division.
Telomeres consist of non-coding repetitive nucleotide...
The centromere is a DNA sequence that links sister chromatids. This is also where kinetochores, protein complexes to which spindle microtubules attach, are constructed after the chromosome is replicated. The kinetochores allow the spindle microtubules to move the chromosomes within the cell during cell division.
Telomeres consist of non-coding repetitive nucleotide...
26.5K
Chromosome Structure
6.3K
6.3K
Enlargement of the Plasma Membrane
2.4K
Cell division and enlargement are processes that require precise control. The control ensures that cell division cannot proceed unless the cell has grown to a specific size. A spherical, dividing cell requires an approximately 1.6X increase in its surface area to double its volume. The secretory pathway also has a significant role in cell membrane enlargement. Secretory vesicles that bud off from the Golgi apparatus and later fuse with the plasma membrane during exocytosis are a major source of...
2.4K
Lampbrush Chromosomes
8.7K
In 1882, Flemming observed lampbrush chromosomes (LBC) in salamander eggs. Later in 1892, Rückert observed LBCs in shark egg cells and coined the term "lampbrush chromosomes" because they looked like brushes used to clean kerosene lamps.
LBCs are made up of two pairs of conjugating homologous chromatids. Each chromatid consists of alternatively positioned regions of condensed-inactive chromatin and loosely placed-active side loops, which can be contracted and extended. The loops...
LBCs are made up of two pairs of conjugating homologous chromatids. Each chromatid consists of alternatively positioned regions of condensed-inactive chromatin and loosely placed-active side loops, which can be contracted and extended. The loops...
8.7K
Polytene Chromosomes
11.0K
Polytene chromosomes are giant interphase chromosomes with several DNA strands placed side by side. They were discovered in the year 1881 by Balbiani in salivary glands, intestine, muscles, malpighian tubules, and hypoderm of larvae Chironomus plumosus. Hence, these are also called "Salivary gland chromosomes." These are found in insects of the order Diptera and Collembola; in certain organs of mammals; and synergids, antipodes of flowering plants. Polytene chromosomes are also...
11.0K

