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Updated: Feb 4, 2026

Capsular Serotyping of Streptococcus pneumoniae Using the Quellung Reaction
Published on: February 24, 2014
Genetic diversity of Streptococcus pneumoniae in Tunisia
B Midouni1, E Mehiri2, A Ghariani2
1Microbiology Laboratory, A. Mami Hospital of Pneumology, UR12/SP18, Ariana, Tunisia; Faculty of Sciences of Tunis, University of Tunis El Manar, Ariana, Tunisia.
Objectives:
This study aimed to explore the genetic diversity of Streptococcus pneumoniae isolates in a Tunisian pneumology hospital.
Methods:
A total of 141 S. pneumoniae strains isolated between 2009-2016 in the microbiology laboratory at A. Mami Hospital of Pneumology were investigated. Antimicrobial susceptibility testing was performed the disk diffusion method. MICs of penicillin G, amoxicillin and cefotaxime were determined by Etest. Serotyping was inferred from the results of multiplex PCR targeting 40 serotypes. Sequence types (STs) were determined by multilocus sequence typing (MLST).
Results:
Among the 141 S. pneumoniae isolates, 98 (69.5%) were resistant to erythromycin. Evaluation of β-lactam susceptibility showed that 90 strains (63.8%) were non-susceptible to penicillin, whereas 48 (34.0%) had decreased susceptibility to amoxicillin and 21 (14.9%) to cefotaxime. Twenty-five serotypes were detected, and 10 isolates were classified as non-typeable. Vaccine coverage was 56.7%, 60.3% and 75.2% for pneumococcal conjugate vaccine 7 (PCV7), PCV10 and PCV13, respectively. Overall, 73 STs were identified, including 23 described for the first time. The most frequent STs were ST179 (n = 17), ST3772 (n = 14), ST2918 (n = 10) and ST4003 (n = 5), related to serotypes 19F, 19A, 14 and 23F, respectively. Moreover, 110 strains were classified within 45 STs. Three international antimicrobial-resistant clones were found, including Denmark14-ST230 (n = 22), Spain9V-ST156 (n = 22) and Portugal19F-ST177 (n = 20).
Conclusion:
This study emphasises the clonal and international dissemination of antimicrobial-resistant S. pneumoniae clones. Significant differences in genetic variation were documented by MLST within the various serotypes identified.
Insights
This study investigated Streptococcus pneumoniae in Tunisia, finding widespread erythromycin resistance and the international spread of resistant clones. Genetic analysis revealed significant diversity among serotypes, highlighting the need for ongoing surveillance of antimicrobial resistance.
Area of Science:
- Microbiology
- Genetics
- Epidemiology
Background:
- Streptococcus pneumoniae is a leading cause of bacterial infections globally.
- Understanding the genetic diversity and antimicrobial resistance patterns of S. pneumoniae is crucial for effective treatment and prevention strategies.
- Previous studies have highlighted the emergence of drug-resistant strains, necessitating continuous monitoring.
Purpose of the Study:
- To explore the genetic diversity of Streptococcus pneumoniae isolates in a Tunisian pneumology hospital.
- To determine antimicrobial susceptibility patterns and identify prevalent serotypes and sequence types (STs).
- To investigate the presence of international antimicrobial-resistant clones.
Main Methods:
- Analysis of 141 S. pneumoniae strains isolated between 2009-2016.
- Antimicrobial susceptibility testing using disk diffusion and Etest for MIC determination.
- Serotyping via multiplex PCR and sequence typing (STs) using multilocus sequence typing (MLST).
Main Results:
- High rates of resistance to erythromycin (69.5%) and non-susceptibility to penicillin (63.8%) were observed.
- Twenty-five serotypes were identified, with vaccine coverage varying for PCV7, PCV10, and PCV13.
- Seventy-three STs were identified, including 23 novel STs, with ST179, ST3772, ST2918, and ST4003 being most frequent.
- Three international antimicrobial-resistant clones (Denmark14-ST230, Spain9V-ST156, Portugal19F-ST177) were identified.
Conclusions:
- The study highlights the clonal and international dissemination of antimicrobial-resistant S. pneumoniae.
- Significant genetic variation exists within different serotypes, as revealed by MLST.
- Findings underscore the importance of continuous surveillance for antimicrobial resistance and genetic diversity of S. pneumoniae in Tunisia.
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