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Published on: November 4, 2016
Efficacy of Propidium Monoazide on Quantitative Real-Time PCR-Based Enumeration of Staphylococcus aureus Live Cells
Hajime Takahashi1, Ryota Kasuga1, Satoko Miya1
1Department of Food Science and Technology, Faculty of Marine Science, Tokyo University of Marine Science and Technology, 4-5-7 Konan, Minato, Tokyo 108-8477, Japan.
Abstract:
Propidium monoazide (PMA) has been used together with quantitative real-time PCR (qPCR) to enumerate live bacteria, while discriminating against the residual DNA of dead bacterial cells. Although the effectiveness of PMA at increasing the accuracy of enumeration of live bacteria treated with heat has been investigated in a number of studies, few studies have involved bacteria treated with sanitizers. In this study, dead Staphylococcus aureus cells were prepared by treatment with six kinds of sanitizers (ethanol, isopropyl alcohol, benzalkonium chloride, sodium hypochlorite, hydrogen peroxide, and nisin) and were mixed with a culture of live bacteria in different ratios. PMA-qPCR was able to accurately enumerate live bacteria with a <0.5 CFU/500 μL difference with that of plate counts for cultures treated with ethanol, isopropyl alcohol, and nisin. For ethanol and isopropyl alcohol treatments, live cells were accurately enumerated for live/dead cell ratios of 10/1 to 0.01/1, while live cells for the nisin treatment were accurately enumerated for live/dead cell ratios of 10/1 to 0.1/1. In contrast, PMA-qPCR was not able to accurately enumerate live cells in bacterial cultures treated with benzalkonium chloride and hydrogen peroxide. In addition, qPCR without PMA was able to enumerate live cells as consistently as plate counts with a bacterial culture treated with sodium hypochlorite. The results of this study show that the use of PMA for qPCR-based enumeration of live cells is not always recommended, and its effectiveness depends on the treatment used on the cells.
Insights
Propidium monoazide quantitative real-time PCR (PMA-qPCR) accurately enumerates live bacteria after treatment with certain sanitizers like ethanol but fails with others. Its effectiveness for live bacterial enumeration depends heavily on the specific sanitizer used.
Area of Science:
- Microbiology
- Molecular Biology
- Analytical Chemistry
Background:
- Quantitative real-time PCR (qPCR) combined with propidium monoazide (PMA) is used to differentiate live from dead bacterial cells by excluding DNA from dead cells.
- Previous studies have focused on PMA's effectiveness with heat-treated bacteria, with limited research on sanitizer-treated bacteria.
Purpose of the Study:
- To evaluate the accuracy of PMA-qPCR for enumerating live bacteria (Staphylococcus aureus) treated with various common sanitizers.
- To compare PMA-qPCR performance across different live/dead cell ratios and sanitizer types.
Main Methods:
- Preparation of dead Staphylococcus aureus cells using six different sanitizers: ethanol, isopropyl alcohol, benzalkonium chloride, sodium hypochlorite, hydrogen peroxide, and nisin.
- Mixing treated dead cells with live bacterial cultures at various ratios.
- Enumeration of live bacteria using PMA-qPCR and comparison with traditional plate counts.
Main Results:
- PMA-qPCR accurately enumerated live bacteria (<0.5 CFU/500 μL difference from plate counts) for treatments with ethanol, isopropyl alcohol, and nisin.
- Accurate enumeration was achieved for live/dead ratios from 10/1 to 0.01/1 (ethanol, isopropyl alcohol) and 10/1 to 0.1/1 (nisin).
- PMA-qPCR failed to accurately enumerate live cells treated with benzalkonium chloride and hydrogen peroxide. qPCR without PMA showed accuracy comparable to plate counts for sodium hypochlorite-treated cells.
Conclusions:
- The efficacy of PMA-qPCR for enumerating live bacteria is sanitizer-dependent and not universally applicable.
- Researchers should carefully consider the type of treatment applied to bacterial cells when deciding to use PMA-qPCR for live cell enumeration.
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