Pol μ dGTP mismatch insertion opposite T coupled with ligation reveals promutagenic DNA repair intermediate

Melike Çağlayan1,2, Samuel H Wilson3

  • 1Genome Integrity and Structural Biology Laboratory, National Institutes of Health, National Institute of Environmental Health Sciences, Research Triangle Park, NC, 27709, USA. caglayanm@ufl.edu.

Nature Communications
|October 13, 2018
PubMed

Insights

DNA polymerase mu inserts mismatched nucleotides, like deoxyguanosine triphosphate (dGTP), opposite template base T. This process, coupled with DNA ligase activity, may drive mutations during double-strand break repair in cancer cells.

Area of Science:

  • Molecular Biology
  • Genetics
  • Cancer Research

Background:

  • Mismatched nucleotide incorporation during DNA replication and repair is a primary cause of mutations in cancer.
  • The dG:dT base pair, resembling Watson-Crick pairing, contributes significantly to genome instability.
  • Understanding these mechanisms is crucial for cancer mutation research.

Purpose of the Study:

  • To investigate the role of DNA polymerase mu in incorporating mismatched nucleotides.
  • To explore the implications of dGTP insertion opposite a template T in DNA repair.
  • To determine the potential contribution of these events to mutagenesis in nonhomologous end joining.

Main Methods:

  • Utilized a model double-strand break DNA repair substrate.
  • Assessed the insertion activity of DNA polymerase mu with 7,8-dihydro-8'-oxo-dGTP (8-oxodGTP) and deoxyguanosine triphosphate (dGTP) opposite a template base T.
  • Evaluated the ligation efficiency of the incorporated nucleotides by DNA ligase.

Main Results:

  • DNA polymerase mu efficiently inserted both 8-oxodGTP and dGTP opposite a template base T.
  • The incorporated dGTP opposite template T was efficiently ligated by DNA ligase.
  • This suggests a pathway for generating mutations during DNA repair.

Conclusions:

  • DNA polymerase mu-mediated insertion of dGTP opposite template T, followed by ligation, can occur.
  • This mechanism may represent a significant source of mutations in nonhomologous end joining.
  • These findings shed light on genome instability and mutagenesis in cancer cells.

Related Concept Videos

Mismatch Repair01:36

Mismatch Repair

Overview
43.7K
Mismatch Repair01:20

Mismatch Repair

Organisms are capable of detecting and fixing nucleotide mismatches that occur during DNA replication. This sophisticated process requires identifying the new strand and replacing the erroneous bases with correct nucleotides. Mismatch repair is coordinated by many proteins in both prokaryotes and eukaryotes.
The Mutator Protein Family Plays a Key Role in DNA Mismatch Repair
The human genome has more than 3 billion base pairs of DNA per cell. Prior to cell division, that vast amount of genetic...
6.6K
Overview of DNA Repair02:25

Overview of DNA Repair

In order to be passed through generations, genomic DNA must be undamaged and error-free. However, every day, DNA in a cell undergoes several thousand to a million damaging events by natural causes and external factors. Ionizing radiation such as UV rays, free radicals produced during cellular respiration, and hydrolytic damage from metabolic reactions can alter the structure of DNA. Damages caused include single-base alteration, base dimerization, chain breaks, and cross-linkage.
Chemically...
33.7K
Overview of DNA Repair02:25

Overview of DNA Repair

9.9K
Base Excision Repair01:54

Base Excision Repair

One of the common DNA damages is the chemical alteration of single bases by alkylation, oxidation, or deamination. The altered bases cause mispairing and strand breakage during replication. This type of damage causes minimal change to the DNA double helix structure and can be repaired by the base excision repair (BER) pathways. BER corrects damaged DNA sequences by removing the damaged base and restoring the original base sequence using the complementary strand as a template.
The first step of...
26.3K
Base-pairing and DNA Repair02:27

Base-pairing and DNA Repair

93.4K