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Updated: Feb 3, 2026

Paraffin-Embedded and Frozen Sections of Drosophila Adult Muscles
Published on: December 27, 2010
Explicit vs. implicit electronic polarisation of environment of an embedded chromophore in frozen-density embedding
Niccolò Ricardi1, Alexander Zech1, Yann Gimbal-Zofka1
1Department of Physical Chemistry, University of Geneva, 30 quai Ernest-Ansermet, CH-1211 Genève, Switzerland. Niccolo.Ricardi@unige.ch Tomasz.Wesolowski@unige.ch.
Abstract:
Frozen-Density Embedding Theory (FDET) provides a system-independent formal framework for multi-level computational methods. Despite apparent similarity, the interaction energy components commonly used in QM/MM methods do not have their corresponding counterparts in FDET. We show how the effect of the polarisation on the electron distribution in the environment can be (or is) accounted for either explicitly or implicitly within the FDET framework. Numerical examples are provided for vertical excitation energies in four representative cases of embedded chromophores.
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