Related Experiment Video
Updated: Feb 3, 2026

Phage-Mediated Genetic Manipulation of the Lyme Disease Spirochete Borrelia burgdorferi
Published on: September 28, 2022
Identification of Essential Oils with Strong Activity against Stationary Phase Borrelia burgdorferi
Jie Feng1, Wanliang Shi2, Judith Miklossy3
1Department of Molecular Microbiology and Immunology, Bloomberg School of Public Health, Johns Hopkins University, Baltimore, MD 21205, USA. jfeng16@jhu.edu.
Abstract:
Lyme disease is the most common vector borne-disease in the United States (US). While the majority of the Lyme disease patients can be cured with 2⁻4 weeks antibiotic treatment, about 10⁻20% of patients continue to suffer from persisting symptoms. While the cause of this condition is unclear, persistent infection was proposed as one possibility. It has recently been shown that B. burgdorferi develops dormant persisters in stationary phase cultures that are not killed by the current Lyme antibiotics, and there is interest in identifying novel drug candidates that more effectively kill such forms. We previously identified some highly active essential oils with excellent activity against biofilm and stationary phase B. burgdorferi. Here, we screened another 35 essential oils and found 10 essential oils (Allium sativum L. bulbs, Pimenta officinalis Lindl. berries, Cuminum cyminum L. seeds, Cymbopogon martini var. motia Bruno grass, Commiphora myrrha (T. Nees) Engl. resin, Hedychium spicatum Buch.-Ham. ex Sm. flowers, Amyris balsamifera L. wood, Thymus vulgaris L. leaves, Litsea cubeba (Lour.) Pers. fruits, Eucalyptus citriodora Hook. leaves) and the active component of cinnamon bark cinnamaldehyde (CA) at a low concentration of 0.1% have strong activity against stationary phase B. burgdorferi. At a lower concentration of 0.05%, essential oils of Allium sativum L. bulbs, Pimenta officinalis Lindl. berries, Cymbopogon martini var. motia Bruno grass and CA still exhibited strong activity against the stationary phase B. burgdorferi. CA also showed strong activity against replicating B. burgdorferi, with a MIC of 0.02% (or 0.2 μg/mL). In subculture studies, the top five essential oil hits Allium sativum L. bulbs, Pimenta officinalis Lindl. berries, Commiphora myrrha (T. Nees) Engl. resin, Hedychium spicatum Buch.-Ham. ex Sm. flowers, and Litsea cubeba (Lour.) Pers. fruits completely eradicated all B. burgdorferi stationary phase cells at 0.1%, while Cymbopogon martini var. motia Bruno grass, Eucalyptus citriodora Hook. leaves, Amyris balsamifera L. wood, Cuminum cyminum L. seeds, and Thymus vulgaris L. leaves failed to do so as shown by visible spirochetal growth after 21-day subculture. At concentration of 0.05%, only Allium sativum L. bulbs essential oil and CA sterilized the B. burgdorferi stationary phase culture, as shown by no regrowth during subculture, while Pimenta officinalis Lindl. berries, Commiphora myrrha (T. Nees) Engl. resin, Hedychium spicatum Buch.-Ham. ex Sm. flowers and Litsea cubeba (Lour.) Pers. fruits essential oils all had visible growth during subculture. Future studies are needed to determine if these highly active essential oils could eradicate persistent B. burgdorferi infection in vivo.
Insights
New essential oils and cinnamaldehyde show potent activity against dormant Lyme disease bacteria (Borrelia burgdorferi). These natural compounds may offer new treatments for persistent Lyme disease symptoms unresponsive to antibiotics.
Area of Science:
- Microbiology
- Infectious Diseases
- Natural Product Chemistry
Background:
- Lyme disease is a prevalent vector-borne illness in the US, with 10-20% of patients experiencing persistent symptoms post-antibiotic treatment.
- Dormant, antibiotic-resistant forms of Borrelia burgdorferi (the causative agent) are implicated in persistent Lyme disease.
- Existing Lyme disease antibiotics are ineffective against these dormant bacterial persisters.
Purpose of the Study:
- To screen essential oils for activity against stationary phase Borrelia burgdorferi.
- To identify novel drug candidates that can effectively kill dormant Lyme disease bacteria.
- To evaluate the efficacy of selected essential oils and cinnamaldehyde against both replicating and stationary phase B. burgdorferi.
Main Methods:
- Screened 35 additional essential oils and cinnamaldehyde (CA) for activity against stationary phase B. burgdorferi.
- Determined Minimum Inhibitory Concentration (MIC) for cinnamaldehyde against replicating B. burgdorferi.
- Conducted subculture studies to assess the eradicating potential of essential oils and CA against stationary phase B. burgdorferi.
Main Results:
- Ten essential oils and cinnamaldehyde demonstrated strong activity against stationary phase B. burgdorferi at 0.1%.
- Allium sativum, Pimenta officinalis, Cymbopogon martini, and cinnamaldehyde retained significant activity at 0.05%.
- Allium sativum essential oil and cinnamaldehyde completely eradicated stationary phase B. burgdorferi at 0.05%, while other oils showed partial efficacy.
Conclusions:
- Several essential oils and cinnamaldehyde exhibit potent activity against dormant Borrelia burgdorferi.
- Allium sativum essential oil and cinnamaldehyde show promise as effective agents against persistent Lyme disease bacteria.
- Further in vivo studies are warranted to confirm the therapeutic potential of these natural compounds for persistent Lyme disease.
Related Concept Videos
Gas Chromatography: Types of Columns and Stationary Phases
For an analyte to remain on the column for a sufficient amount of time, it must exhibit some level of compatibility (or...
Titration Calculations: Strong Acid - Strong Base
A titration is carried out for 25.00 mL of 0.100 M HCl (strong acid) with 0.100 M of a strong base NaOH. The pH at different volumes of added base solution can be calculated as follows:
(a) Titrant volume = 0 mL. The solution pH is due to the acid ionization of HCl. Because this is a strong acid, the ionization is complete and the hydronium ion molarity is 0.100 M. The pH of the solution is then:
Strong Acid and Base Solutions
Titration of a Strong Acid with a Strong Base
Phase Transitions
Compounds Essential to Human Function
Inorganic Compounds Essential to Human Functioning
Inorganic compounds essential to human functioning include water, salts, acids, and bases. These compounds are inorganic, i.e., they do not have a carbon-hydrogen bond. Water...

