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Updated: Feb 3, 2026

Assays for Validating Histone Acetyltransferase Inhibitors
Published on: August 6, 2020
Recent Progress in Histone Deacetylase Inhibitors as Anticancer Agents
Loredana Cappellacci1, Diego R Perinelli1, Filippo Maggi1
1School of Pharmacy, Medicinal Chemistry Unit, University of Camerino, Via S. Agostino 1, 62032 Camerino, Italy.
Abstract:
Histone Deacetylase (HDAC) inhibitors are a relatively new class of anti-cancer agents that play important roles in epigenetic or non-epigenetic regulation, inducing death, apoptosis, and cell cycle arrest in cancer cells. Recently, their use has been clinically validated in cancer patients resulting in the approval by the FDA of four HDAC inhibitors, vorinostat, romidepsin, belinostat and panobinostat, used for the treatment of cutaneous/peripheral T-cell lymphoma and multiple myeloma. Many more HDAC inhibitors are at different stages of clinical development for the treatment of hematological malignancies as well as solid tumors. Also, clinical trials of several HDAC inhibitors for use as anti-cancer drugs (alone or in combination with other anti-cancer therapeutics) are ongoing. In the intensifying efforts to discover new, hopefully, more therapeutically efficacious HDAC inhibitors, molecular modelingbased rational drug design has played an important role. In this review, we summarize four major structural classes of HDAC inhibitors (hydroxamic acid derivatives, aminobenzamide, cyclic peptide and short-chain fatty acids) that are in clinical trials and different computer modeling tools available for their structural modifications as a guide to discover additional HDAC inhibitors with greater therapeutic utility.
Insights
Histone Deacetylase (HDAC) inhibitors are promising anti-cancer agents that induce cancer cell death. Molecular modeling aids in designing new HDAC inhibitors for improved cancer therapy.
Area of Science:
- Oncology
- Pharmacology
- Epigenetics
Background:
- Histone Deacetylase (HDAC) inhibitors represent a novel class of anti-cancer therapeutics.
- These agents modulate epigenetic and non-epigenetic pathways, inducing apoptosis and cell cycle arrest in cancer cells.
- Four HDAC inhibitors (vorinostat, romidepsin, belinostat, panobinostat) are FDA-approved for specific hematological malignancies.
Purpose of the Study:
- To review major structural classes of HDAC inhibitors currently in clinical trials.
- To discuss the role of molecular modeling in the rational design of novel HDAC inhibitors.
- To guide the discovery of HDAC inhibitors with enhanced therapeutic efficacy.
Main Methods:
- Literature review of HDAC inhibitors in clinical development.
- Analysis of four major structural classes: hydroxamic acid derivatives, aminobenzamide, cyclic peptides, and short-chain fatty acids.
- Exploration of computer modeling tools for structural modification and drug design.
Main Results:
- Identified four key structural classes of HDAC inhibitors in clinical trials.
- Highlighted the utility of molecular modeling in guiding the development of new HDAC inhibitors.
- Emphasized ongoing clinical trials for various hematological malignancies and solid tumors.
Conclusions:
- HDAC inhibitors show significant therapeutic potential in cancer treatment.
- Rational drug design, particularly molecular modeling, is crucial for discovering more effective HDAC inhibitors.
- Continued research and clinical evaluation are essential for expanding the application of HDAC inhibitors.
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