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Updated: Feb 3, 2026

Functional Assessment of BRCA1 variants using CRISPR-Mediated Base Editors
Published on: February 28, 2021
CtIP-Mediated Fork Protection Synergizes with BRCA1 to Suppress Genomic Instability upon DNA Replication Stress
Sara Przetocka1, Antonio Porro1, Hella A Bolck1
1Institute of Molecular Cancer Research, University of Zurich, Winterthurerstrasse 190, CH-8057 Zurich, Switzerland.
Abstract:
Protecting stalled DNA replication forks from degradation by promiscuous nucleases is essential to prevent genomic instability, a major driving force of tumorigenesis. Several proteins commonly associated with the repair of DNA double-strand breaks (DSBs) by homologous recombination (HR) have been implicated in the stabilization of stalled forks. Human CtIP, in conjunction with the MRE11 nuclease complex, plays an important role in HR by promoting DSB resection. Here, we report an unanticipated function for CtIP in protecting reversed forks from degradation. Unlike BRCA proteins, which defend nascent DNA strands from nucleolytic attack by MRE11, we find that CtIP protects perturbed forks from erroneous over-resection by DNA2. Finally, we uncover functionally synergistic effects between CtIP and BRCA1 in mitigating replication-stress-induced genomic instability. Collectively, our findings reveal a DSB-resection- and MRE11-independent role for CtIP in preserving fork integrity that contributes to the survival of BRCA1-deficient cells.
Insights
CtIP safeguards stalled DNA replication forks from degradation by DNA2, a role distinct from its function in DNA double-strand break repair. This finding is crucial for understanding genomic instability and cancer development, especially in BRCA1-deficient cells.
Area of Science:
- Molecular Biology
- Genetics
- Cancer Research
Background:
- Genomic instability, driven by errors in DNA replication, is a hallmark of cancer.
- Proteins involved in DNA double-strand break (DSB) repair, such as CtIP and BRCA1, are critical for maintaining genome stability.
- CtIP typically functions with the MRE11 complex to promote DSB resection during homologous recombination (HR).
Purpose of the Study:
- To investigate the role of CtIP in protecting stalled DNA replication forks.
- To elucidate CtIP's mechanism in preventing fork degradation, particularly its relationship with BRCA proteins and nucleases like DNA2 and MRE11.
- To understand the contribution of CtIP to genomic stability, especially in the context of BRCA1 deficiency.
Main Methods:
- Investigated the function of CtIP in protecting reversed DNA replication forks.
- Compared the protective mechanisms of CtIP and BRCA proteins against nucleolytic degradation by MRE11 and DNA2.
- Assessed the synergistic effects of CtIP and BRCA1 in mitigating replication stress-induced genomic instability.
Main Results:
- CtIP plays an unexpected role in protecting reversed replication forks from degradation by the DNA2 nuclease.
- This protective function of CtIP is independent of DSB resection and the MRE11 complex.
- CtIP and BRCA1 exhibit synergistic effects in preventing genomic instability caused by replication stress, highlighting CtIP's importance for the survival of BRCA1-deficient cells.
Conclusions:
- CtIP has a novel, MRE11-independent function in preserving DNA replication fork integrity by preventing over-resection by DNA2.
- This mechanism contributes to genome stability and is particularly vital for cells lacking BRCA1.
- The findings reveal a new layer of fork protection and offer insights into therapeutic strategies for BRCA1-deficient cancers.
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