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Methanol Independent Expression by Pichia Pastoris Employing De-repression Technologies
Published on: January 23, 2019
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A Simple Two Dimensional Model of Methanol.
Tomislav Primorac1,2, Martina Požar1,3, Franjo Sokolić1
1Faculty of Science, University of Split, Rudjera Boškovića 33, 21000 Split, Croatia.
Summary
Two-dimensional models of methanol, inspired by water models, reveal clustering tendencies and thermodynamic properties. These simulations offer insights into methanol
Area of Science:
- Physical Chemistry
- Computational Chemistry
- Materials Science
Background:
- Methanol is a simple alcohol with potential as a clean energy carrier.
- Understanding methanol's molecular behavior is crucial for its applications.
- Existing models for water, like the Mercedes-Benz model, provide a basis for studying other simple molecules.
Purpose of the Study:
- To examine simple two-dimensional models of methanol using Monte Carlo simulations.
- To compare two distinct 2D methanol models (overlapping discs and tangentially fused dimers) with each other and with 3D models.
- To assess the models' ability to replicate experimental and 3D simulation results for methanol's structure and thermodynamics.
Main Methods:
- Monte Carlo simulations were employed to study two-dimensional models of methanol.
- Methanol particles were represented as dimers: a Lennard-Jones disk (methyl group) and a sphere with hydrogen bonding arms (hydroxyl group).
- Two models were used: Hribar-Lee and Dill's overlapping discs model and a new tangentially fused dimers model.
Main Results:
- Both 2D methanol models exhibited similar trends in molecular structuring and thermodynamics.
- At lower temperatures, the smaller model showed spontaneous crystallization, while the larger model displayed metastable states.
- The 2D models successfully represented the clustering behavior observed in 3D simulations and experimental data.
- The models qualitatively agreed with bulk methanol properties like density and isothermal compressibility.
- Heat capacity at constant pressure showed a trend more akin to water's behavior.
Conclusions:
- Two-dimensional models provide a simplified yet effective platform for studying methanol's physical properties.
- These models capture essential aspects of methanol's molecular organization and thermodynamic behavior, including the interplay of polar and non-polar interactions.
- The study highlights the utility of simplified models in understanding complex molecular systems and their potential as energy carriers.
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