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Characterizing Exon Skipping Efficiency in DMD Patient Samples in Clinical Trials of Antisense Oligonucleotides
Published on: May 7, 2020
Shorter Phosphorodiamidate Morpholino Splice-Switching Oligonucleotides May Increase Exon-Skipping Efficacy in DMD
Ugur Akpulat1, Haicui Wang2, Kerstin Becker2
1Center for Molecular Medicine Cologne (CMMC), University of Cologne, Cologne 50931, Germany; Department of Pediatrics, University Hospital Cologne, Cologne 50937, Germany; Department of Medical Biology, Faculty of Medicine, Kastamonu University, Kastamonu 37100, Turkey.
Abstract:
Duchenne muscular dystrophy is a fatal muscle disease, caused by mutations in DMD, leading to loss of dystrophin expression. Phosphorodiamidate morpholino splice-switching oligonucleotides (PMO-SSOs) have been used to elicit the restoration of a partially functional truncated dystrophin by excluding disruptive exons from the DMD messenger. The 30-mer PMO eteplirsen (EXONDYS51) developed for exon 51 skipping is the first dystrophin-restoring, conditionally FDA-approved drug in history. Clinical trials had shown a dose-dependent variable and patchy dystrophin restoration. The main obstacle for efficient dystrophin restoration is the inadequate uptake of PMOs into skeletal muscle fibers at low doses. The excessive cost of longer PMOs has limited the utilization of higher dosing. We designed shorter 25-mer PMOs directed to the same eteplirsen-targeted region of exon 51 and compared their efficacies in vitro and in vivo in the mdx52 murine model. Our results showed that skipped-dystrophin induction was comparable between the 30-mer PMO sequence of eteplirsen and one of the shorter PMOs, while the other 25-mer PMOs showed lower exon-skipping efficacies. Shorter PMOs would make higher doses economically feasible, and high dosing would result in better drug uptake into muscle, induce higher levels of dystrophin restoration in DMD muscle, and, ultimately, increase the clinical efficacy.
Insights
Shorter phosphorodiamidate morpholino splice-switching oligonucleotides (PMO-SSOs) show promise for Duchenne muscular dystrophy treatment. These PMO-SSOs may enable higher, more cost-effective dosing for improved dystrophin restoration in muscles.
Area of Science:
- Molecular Biology
- Genetics
- Pharmacology
Background:
- Duchenne muscular dystrophy (DMD) is a fatal genetic disorder caused by mutations in the DMD gene, resulting in a lack of functional dystrophin.
- Current treatments using phosphorodiamidate morpholino splice-switching oligonucleotides (PMO-SSOs) like eteplirsen aim to restore dystrophin by skipping specific exons, but face challenges with low muscle uptake and high costs.
- Eteplirsen (EXONDYS51), a 30-mer PMO targeting exon 51, is the first FDA-approved drug for DMD, though clinical trials showed variable dystrophin restoration.
Purpose of the Study:
- To investigate the efficacy of shorter 25-mer PMO-SSOs targeting the same exon 51 region as eteplirsen.
- To determine if shorter PMOs can achieve comparable dystrophin restoration to longer PMOs.
- To assess the potential for shorter PMOs to enable economically feasible higher dosing strategies for DMD treatment.
Main Methods:
- Design and synthesis of 25-mer PMO-SSOs targeting the eteplirsen-responsive region of DMD exon 51.
- In vitro and in vivo comparative efficacy studies using the mdx52 murine model of DMD.
- Assessment of exon-skipping efficacy and subsequent skipped-dystrophin induction.
Main Results:
- One of the designed 25-mer PMO-SSOs demonstrated comparable skipped-dystrophin induction to the 30-mer PMO eteplirsen.
- Other 25-mer PMO sequences exhibited lower exon-skipping efficacy.
- These findings suggest that optimized shorter PMOs can be as effective as longer ones in restoring dystrophin.
Conclusions:
- Shorter PMO-SSOs targeting exon 51 are a viable alternative to longer PMOs for Duchenne muscular dystrophy.
- The development of cost-effective shorter PMOs could facilitate higher dosing regimens.
- Higher dosing of PMO-SSOs is expected to improve drug uptake, enhance dystrophin restoration levels, and ultimately increase clinical efficacy in DMD patients.
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