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Updated: Feb 2, 2026

Detection of Targetable Alterations in Non-small Cell Lung Cancer using Next-generation Sequencing
Published on: October 10, 2025
Crizotinib presented with promising efficacy but for concomitant mutation in next-generation sequencing-identified
Liang Zeng1, Yizhi Li1, Lili Xiao1
1Department of Medical Oncology, Lung Cancer and Gastrointestinal Unit, Hunan Cancer Hospital/The Affiliated Cancer Hospital of Xiangya School of Medicine, Changsha 410013, China, zhangyongchang@csu.edu.cn; yangnong0217@163.com.
Introduction:
Data of standard tyrosine kinase inhibitor (TKI) treatment outcome in next-generation sequencing (NGS)-identified ROS1-rearranged non-small-cell lung cancer (NSCLC) were rare. Thus, it is practical and necessary to evaluate the efficacy and influential factors of crizotinib in real-world practice.
Patients And Methods:
A total of 1,466 NSCLC patients with positive targeted NGS test results from September 2015 to January 2018 were enrolled in this real-world retrospective study. Twenty-two patients had ROS1 rearrangement detected by NGS. The efficacy and safety of crizotinib were evaluated. Subgroups of concomitant mutations, brain metastasis, and fusion variants were also analyzed.
Results:
Among all the patients, the occurrence rate of ROS1 rearrangement was 1.5% (22 of 1,466). Ten ROS1 fusion partners were detected, and the most common variant was CD74, which accounted for 50% (11 of 22). Five patients were found to carry dual ROS1 fusion partners, and 23% (5 of 22) of patients were detected with concomitant mutations, including TP53&PIK3CA&mTOR mutation, TP53&CDKN2A mutation, TP53&BRCA2 mutation, ALK missense mutation (p.R311H), and MET amplification. Among 22 patients with ROS1-rearranged NSCLC, 20 patients were diagnosed at stage IV, and 19 patients received crizotinib treatment. The average follow-up period was 16 months. The overall response rate (ORR) of crizotinib in unselected crizotinib-treated patients was 89%, and the median progression-free survival time (mPFS) was 13.6 months. It was shown that NSCLC patients with exclusive ROS1 rearrangement had a longer PFS than those carrying concomitant mutations (15.5 vs 8.5 months, P=0.0213). There were no newly occurring intolerant adverse events in this study.
Conclusion:
Crizotinib is highly effective in NGS-identified ROS1-rearranged advanced NSCLC in real-word clinical practice, and the data are consistent with previous clinical trials applying fluorescence in situ hybridization/real-time PCR for ROS1 companion diagnosis. Concomitant mutations may not be rare and may deteriorate the PFS of crizotinib in patients with ROS1-rearranged NSCLC.
Insights
Crizotinib shows high efficacy in ROS1-rearranged non-small-cell lung cancer (NSCLC) patients identified by next-generation sequencing (NGS). Concomitant mutations may negatively impact progression-free survival in these patients.
Area of Science:
- Oncology
- Genomics
- Pharmacology
Background:
- Next-generation sequencing (NGS) has identified ROS1 rearrangements in non-small-cell lung cancer (NSCLC).
- Real-world data on tyrosine kinase inhibitor (TKI) treatment outcomes for ROS1-rearranged NSCLC are limited.
- Evaluating crizotinib's efficacy and influencing factors in a real-world setting is crucial.
Purpose of the Study:
- To assess the efficacy and safety of crizotinib in patients with ROS1-rearranged NSCLC identified through NGS.
- To identify factors influencing treatment outcomes, including concomitant mutations and fusion variants.
Main Methods:
- Retrospective analysis of 1,466 NSCLC patients undergoing targeted NGS.
- Identification of 22 patients with ROS1 rearrangement.
- Evaluation of crizotinib efficacy, safety, and subgroup analyses (concomitant mutations, brain metastasis, fusion variants).
Main Results:
- ROS1 rearrangement occurred in 1.5% of NSCLC patients.
- CD74 was the most common fusion partner (50%).
- Concomitant mutations were detected in 23% of patients.
- Crizotinib demonstrated an 89% overall response rate (ORR) and a 13.6-month median progression-free survival (mPFS).
- Patients with exclusive ROS1 rearrangement had significantly longer PFS than those with concomitant mutations (15.5 vs. 8.5 months, P=0.0213).
- No new safety concerns were identified.
Conclusions:
- Crizotinib is highly effective for ROS1-rearranged advanced NSCLC in real-world practice.
- Findings align with previous clinical trials using FISH/real-time PCR for ROS1 diagnosis.
- Concomitant mutations are potentially common and may reduce crizotinib's PFS benefit in ROS1-rearranged NSCLC.
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