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Updated: Feb 2, 2026

Tandem Affinity Purification of Protein Complexes from Eukaryotic Cells
Published on: January 26, 2017
An efficient method for FITC labelling of proteins using tandem affinity purification.
Lalith K Chaganti1,2, Navneet Venkatakrishnan1, Kakoli Bose3,2
1Advanced Centre for Treatment, Research and Education in Cancer (ACTREC), Tata Memorial Centre, Kharghar, Navi Mumbai 410210, India.
This study introduces a modified protein labeling protocol using tandem affinity purification tags to overcome limitations of fluorescein isothiocyanate (FITC) labeling. The new method reduces background fluorescence and improves protein stability for enhanced fluorescence-based assays.
Area of Science:
- Biochemistry
- Molecular Biology
- Biophysics
Background:
- Fluorescence-based assays are vital for studying protein dynamics and interactions.
- Fluorescein isothiocyanate (FITC) is a common labeling reagent but has limitations.
- Existing methods require high protein concentrations and struggle with background fluorescence.
Purpose of the Study:
- To develop an improved protein labeling protocol for fluorescence assays.
- To overcome limitations associated with traditional FITC labeling.
- To enhance the efficiency and reduce background noise in fluorescence studies.
Main Methods:
- Modification of existing protein labeling protocols.
- Introduction of tandem affinity purification tags at protein termini.
- Utilizing modified protocol for protein labeling with fluorescein isothiocyanate (FITC).
Main Results:
- Efficiently labeled target protein achieved.
- Significant decrease in protein precipitation and degradation observed.
- Reduced background fluorescence from unreacted FITC.
Conclusions:
- The modified protocol enhances protein labeling efficiency and stability.
- This technique minimizes background noise, improving fluorescence assay reliability.
- The facile and rapid method has broad applications for spectroscopic studies with various fluorophores.
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