Data on transcriptome profiling of circulating microRNAs in dairy cattle
Kesavan Markkandan1, Hyun-Joo Lim2, Dong Jin Lee1
1Theragen ETEX Bio Institute, Suwon, Gyeonggi-do 16229, Republic of Korea.
Data in Brief
|November 13, 2018
Summary
Circulating microRNAs (miRNAs) in dairy cows show significant expression changes during pregnancy. This study identified 147 differentially expressed miRNAs at 60 days of pregnancy, highlighting their potential as pregnancy biomarkers.
Area of Science:
- Veterinary Science
- Molecular Biology
- Biochemistry
Background:
- MicroRNAs (miRNAs) are small non-coding RNAs found in biofluids, emerging as critical biomarkers.
- Circulating miRNAs in blood offer a non-invasive window into physiological states.
- Pregnancy diagnosis in dairy cattle can benefit from novel molecular markers.
Purpose of the Study:
- To profile and identify pregnancy-associated circulating microRNAs in dairy cattle.
- To compare miRNA expression patterns between normal and pregnant states at different gestational stages.
- To discover potential miRNA biomarkers for early pregnancy detection in dairy cows.
Main Methods:
- Circulating miRNAs were isolated from blood samples of healthy dairy cows.
- Next-generation sequencing (Illumina RNA-Seq) was employed for miRNA profiling.
- Differential gene expression (DEG) analysis was performed to identify significant miRNA changes.
Main Results:
- Analysis of 30 days of pregnancy (DOP) revealed perturbations in miRNA expression compared to normal states.
- Comparison between normal and 60 DOP libraries identified 147 known miRNAs with differential expression.
- Stage-specific miRNAs associated with pregnancy were predicted.
Conclusions:
- Circulating miRNA profiles change significantly during dairy cattle pregnancy.
- Specific miRNAs identified at 60 DOP hold potential as biomarkers for pregnancy.
- Further validation of these miRNAs could lead to improved pregnancy diagnostics in cattle.
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