The essentiality of drug targets: an analysis of current literature and genomic databases

Xiao Ji1, Deepak K Rajpal1, Johannes M Freudenberg1

  • 1Computational Biology, GSK R&D, Collegeville, PA, USA.

Drug Discovery Today
|November 16, 2018
PubMed

Insights

Essential genes, crucial for survival, are more frequently implicated in cardiovascular diseases and neoplasms. Their essentiality status is a key factor for evaluating new drug targets in human disease therapy.

Area of Science:

  • Genetics
  • Pharmacology
  • Human Disease Research

Background:

  • Essential genes encode proteins vital for organism survival.
  • The therapeutic potential of essential genes as drug targets remains underexplored.
  • Understanding gene essentiality is critical for advancing disease treatment strategies.

Purpose of the Study:

  • To evaluate the involvement of essential genes in human diseases.
  • To assess the suitability of essential genes as therapeutic targets.
  • To analyze differences between essential and nonessential genes in drug discovery contexts.

Main Methods:

  • Utilized a catalog of approximately 9000 known essential and nonessential genes.
  • Assessed gene involvement across various therapeutic areas.
  • Compared essential and nonessential genes across relevant protein classes for drug discovery.

Main Results:

  • Essential genes show a higher likelihood of involvement in cardiovascular diseases and neoplasms compared to nonessential genes.
  • Significant differences were observed between essential and nonessential genes within protein classes relevant to drug discovery.
  • Gene essentiality is a significant factor influencing therapeutic target selection.

Conclusions:

  • Essential gene status is a critical consideration for identifying and validating new drug targets.
  • This research highlights the importance of essential genes in specific disease areas, including cardiovascular diseases and neoplasms.
  • The findings provide a basis for prioritizing therapeutic targets in drug discovery pipelines.

Related Concept Videos

Mesh Analysis with Current Sources01:10

Mesh Analysis with Current Sources

Mesh analysis becomes simpler when analyzing circuits with current sources, whether independent or dependent. The presence of current sources reduces the number of equations required for analysis. Two cases illustrate this:
Current Source in One Mesh: The analysis process is straightforward when a current source is found in only one mesh within the circuit. Mesh currents are assigned as usual, with the mesh containing the current source excluded from the analysis. Kirchhoff's voltage law...
2.0K
Targets for Drug Action: Overview01:26

Targets for Drug Action: Overview

Drugs target macromolecules to modify ongoing cellular processes. Primary drug targets include receptors, ion channels, transporters, and enzymes.
Receptors are either membrane-spanning or intracellular proteins, which upon binding a ligand, get activated and transmit the signal downstream to elicit a response. Drugs bind receptors, either mimicking the action of endogenous ligands or blocking the receptor activity to bring about a modified response. Nearly 35% of approved drugs target the G...
10.3K
Genomics02:02

Genomics

Genomics is the science of genomes: it is the study of all the genetic material of an organism. In humans, the genome consists of information carried in 23 pairs of chromosomes in the nucleus, as well as mitochondrial DNA. In genomics, both coding and non-coding DNA is sequenced and analyzed. Genomics allows a better understanding of all living things, their evolution, and their diversity. It has a myriad of uses: for example, to build phylogenetic trees, to improve productivity and...
40.7K
Compounds Essential to Human Function01:25

Compounds Essential to Human Function

The human body is composed of cells that are fundamentally made up of several different molecules. These molecules are essential to carry out all physiological processes in the body and are broadly classified into organic and inorganic based on their chemical structures.
Inorganic Compounds Essential to Human Functioning
Inorganic compounds essential to human functioning include water, salts, acids, and bases. These compounds are inorganic, i.e., they do not have a carbon-hydrogen bond. Water...
10.2K
Essential Minerals for Bone Health01:31

Essential Minerals for Bone Health

The minerals contained in all of the food we consume are essential for our organ systems. However, certain essential minerals, such as calcium, phosphorus, magnesium, manganese, and fluoride, largely affect bone health.
Calcium and Phosphorus
Calcium is a critical component of bones, especially in the form of calcium phosphate and calcium carbonate. Since the body cannot make calcium, it must be obtained from the diet. However, calcium cannot be absorbed from the small intestine without...
6.4K
Genome Size and the Evolution of New Genes03:21

Genome Size and the Evolution of New Genes

While every living organism has a genome of some kind (be it RNA, or DNA), there is considerable variation in the sizes of these blueprints. One major factor that impacts genome size is whether the organism is prokaryotic or eukaryotic. In prokaryotes, the genome contains little to no non-coding sequence, such that genes are tightly clustered in groups or operons sequentially along the chromosome. Conversely, the genes in eukaryotes are punctuated by long stretches of non-coding sequence.
9.1K