Related Experiment Video
Updated: Feb 2, 2026

Deciphering the Structural Effects of Activating EGFR Somatic Mutations with Molecular Dynamics Simulation
Published on: May 20, 2020
Adlayer structure and lattice size effects on catalytic rates predicted from KMC simulations: NO oxidation on Pt(111)
Konstantinos G Papanikolaou1, Matthew T Darby1, Michail Stamatakis1
1Department of Chemical Engineering, University College London, Roberts Building, Torrington Place, London WC1E 7JE, United Kingdom.
Abstract:
Repulsive and/or attractive interactions between surface adsorbates have an important effect on the structure of the adsorbate layer and consequently on the rate of heterogeneous catalytic reactions. Thus, developing reaction models that take into account adsorbate-adsorbate interactions is crucial for making accurate predictions of the catalytic rate and surface coverage during reaction. In the present work, we employ kinetic Monte Carlo simulation to model the catalytic NO oxidation on Pt (111), adopting a cluster expansion (CE) Hamiltonian approach for treating the aforementioned interactions. We investigate CEs of increasing complexity, ranging from pairwise 1st nearest neighbor to long-range and many-body terms. We show that energetic models incorporating solely short-range interactions result in ordered adlayer structures, which are disrupted by anti-phase boundaries and defective regions when the size of the periodic lattice is non-commensurate to the structure of the stable adlayer. We find that O2 dissociates on sites located in these defective regions, which are predominantly responsible for the activity, and the predicted catalytic rate is strongly depended on the lattice size. Such effects are absent when employing non-periodic lattices, whereon the catalytic activity appears more intense on edges/corner sites. Finally, inclusion of long-range interactions in the model Hamiltonian induces relative disorder in the adsorbate layer, which is ascribed to the "softening" of the repulsive interactions between adspecies. Under these circumstances, the distribution of activation energies for O2 dissociation is broader as compared to short-range interaction models and on this basis we explain the disparate catalytic rate predictions when using different CEs.
Related Concept Videos
Trends in Lattice Energy: Ion Size and Charge
Lattice Centering and Coordination Number
Types of Unit Cells
Imagine taking a large number of identical...
Ionic Crystal Structures
Most monatomic ions behave as charged spheres, and their attraction for ions of opposite charge is the same in every direction. Consequently, stable structures for ionic compounds result (1) when ions of one charge are surrounded by as many ions as possible of the opposite...
Size and Structure of Viral Genomes
Rate-Determining Steps
In a multistep reaction mechanism, one of the elementary steps progresses significantly slower than the others. This slowest step is called the rate-limiting step (or rate-determining step). A reaction cannot proceed faster than its slowest step, and hence, the rate-determining step limits the overall reaction rate.
The concept of rate-determining step can be understood from the analogy of a 4-lane freeway with a short-stretch of traffic-bottleneck caused due to...
Bewley Lattice Diagram

