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Yeast As a Chassis for Developing Functional Assays to Study Human P53
Published on: August 4, 2019
ZNF185 is a p53 target gene following DNA damage
Artem Smirnov1, Angela Cappello1, Anna Maria Lena1
1Department of Experimental Medicine, TOR, University of Rome "Tor Vergata", Rome 00133, Italy.
Abstract:
The transcription factor p53 is a key player in the tumour suppressive DNA damage response and a growing number of target genes involved in these pathways has been identified. p53 has been shown to be implicated in controlling cell motility and its mutant form enhances metastasis by loss of cell directionality, but the p53 role in this context has not yet being investigated. Here, we report that ZNF185, an actin cytoskeleton-associated protein from LIM-family of Zn-finger proteins, is induced following DNA-damage. ChIP-seq analysis, chromatin crosslinking immune-precipitation experiments and luciferase assays demonstrate that ZNF185 is a bona fide p53 target gene. Upon genotoxic stress, caused by DNA-damaging drug etoposide and UVB irradiation, ZNF185 expression is up-regulated and in etoposide-treated cells, ZNF185 depletion does not affect cell proliferation and apoptosis, but interferes with actin cytoskeleton remodelling and cell polarization. Bioinformatic analysis of different types of epithelial cancers from both TCGA and GTEx databases showed a significant decrease in ZNF185 mRNA level compared to normal tissues. These findings are confirmed by tissue micro-array IHC staining. Our data highlight the involvement of ZNF185 and cytoskeleton changes in p53-mediated cellular response to genotoxic stress and indicate ZNF185 as potential biomarker for epithelial cancer diagnosis.
Insights
The tumor suppressor p53 induces ZNF185 expression after DNA damage, impacting cell structure and polarization. Reduced ZNF185 in cancers suggests its potential as a diagnostic biomarker.
Area of Science:
- Molecular Biology
- Cell Biology
- Cancer Research
Background:
- The tumor suppressor p53 is crucial for DNA damage response, regulating target genes involved in cell cycle control.
- p53's role in cell motility and metastasis, particularly concerning directional cell movement, remains largely unexplored.
- Actin cytoskeleton dynamics are essential for cell shape, motility, and polarization, processes often dysregulated in cancer.
Purpose of the Study:
- To investigate the role of ZNF185, an actin cytoskeleton-associated protein, in the p53-mediated response to DNA damage.
- To determine if ZNF185 is a direct target gene of p53.
- To explore the functional consequences of ZNF185 modulation on cellular processes and its potential as a cancer biomarker.
Main Methods:
- Chromatin immunoprecipitation sequencing (ChIP-seq) and luciferase assays to identify p53 target genes.
- Genotoxic stress induction using etoposide and UVB irradiation.
- ZNF185 depletion experiments to assess effects on cell proliferation, apoptosis, actin cytoskeleton remodeling, and cell polarization.
- Bioinformatic analysis of TCGA and GTEx databases for ZNF185 mRNA levels in cancer versus normal tissues.
- Tissue microarray immunohistochemistry (IHC) staining for ZNF185 protein levels.
Main Results:
- ZNF185 is identified as a direct p53 target gene, with its expression upregulated upon genotoxic stress.
- ZNF185 depletion in etoposide-treated cells did not affect proliferation or apoptosis but impaired actin cytoskeleton remodeling and cell polarization.
- Bioinformatic analysis revealed significantly decreased ZNF185 mRNA levels in various epithelial cancers compared to normal tissues.
- IHC staining confirmed reduced ZNF185 protein levels in cancerous tissues.
Conclusions:
- ZNF185 is a novel p53 target gene involved in regulating the actin cytoskeleton and cell polarization in response to genotoxic stress.
- The downregulation of ZNF185 in epithelial cancers suggests its involvement in tumorigenesis and metastasis.
- ZNF185 represents a potential diagnostic biomarker for epithelial cancers, warranting further investigation.
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