Sex-dependent gene expression after ochratoxin A insult in F344 rat kidney

Ariane Vettorazzi1, Laura Pastor2, Elizabeth Guruceaga3

  • 1University of Navarra, Department of Pharmacology and Toxicology, Faculty of Pharmacy and Nutrition, E-31008, Pamplona, Spain; IdiSNA, Navarra Institute for Health Research, E-31008, Pamplona, Spain.

Insights

Ochratoxin A (OTA) affects male and female rat kidneys differently, with males showing clearer dose-dependent responses. While females had more altered genes, males exhibited more enriched toxicity pathways, highlighting sex-specific kidney responses to OTA exposure.

Area of Science:

  • Toxicology
  • Genomics
  • Molecular Biology

Background:

  • Ochratoxin A (OTA) is a known nephrocarcinogen in rodents, with observed sex-based differences in sensitivity.
  • Understanding sex-specific molecular responses to OTA is crucial for accurate risk assessment.

Purpose of the Study:

  • To investigate sex-specific gene expression and DNA methylation changes in rat kidneys following OTA exposure.
  • To compare the transcriptomic and epigenetic responses to OTA between male and female F344 rats.

Main Methods:

  • Whole genome transcriptomics (RNA sequencing) was employed to analyze kidney gene expression.
  • DNA methylation analysis of selected genes was performed using MALDI-TOF mass spectrometry.
  • Rats were treated with two doses of OTA (0.21 or 0.50 mg/kg bw) for 21 days.

Main Results:

  • OTA exposure induced dose-dependent responses in both sexes, more pronounced in males.
  • Females exhibited a higher number of altered genes, but males showed more significantly enriched toxicity lists at a lower dose.
  • Both sexes displayed modulation of damage, signaling, metabolism, inflammation, proliferation, and oxidative stress pathways; however, specific pathways were uniquely affected in each sex.
  • No significant biologically relevant changes in DNA methylation were detected.

Conclusions:

  • Kidney response to OTA is sex-dependent, with distinct transcriptomic profiles and affected pathways in males and females.
  • While OTA impacts common toxicity pathways, sex-biased gene modulation, particularly in phase I/II enzymes, transporters, and nuclear receptors, contributes to differential responses.
  • The study underscores the importance of considering sex as a biological variable in toxicological assessments of Ochratoxin A.

Related Concept Videos

What is Gene Expression?01:42

What is Gene Expression?

Overview
Gene expression is the process in which DNA directs the synthesis of functional products, that is, proteins. Cells can regulate gene expression at various stages. It allows organisms to generate different cell types and enables cells to adapt to internal and external factors.
Genetic Information Flows from DNA to RNA to Protein
A gene is a stretch of DNA that serves as the blueprint for functional RNAs and proteins. Since DNA is made up of nucleotides and proteins consist of amino...
196.7K
What is Gene Expression?01:36

What is Gene Expression?

A gene is a stretch of DNA that serves as the blueprint for functional RNAs and proteins. Since DNA is comprised  of nucleotides and proteins are comprised of amino acids, a mediator is required to convert the information encoded in DNA into proteins. This mediator is the messenger RNA (mRNA). mRNA copies the blueprint from DNA by a process called transcription. In eukaryotes, transcription occurs in the nucleus by complementary base-pairing with the DNA template. The mRNA is then...
11.4K
Chromatin Position Affects Gene Expression02:35

Chromatin Position Affects Gene Expression

Chromatin is the massive complex of DNA and proteins packaged inside the nucleus. The complexity of chromatin folding and how it is packaged inside the nucleus greatly influences  access to genetic information. Generally, the nucleus' periphery is considered transcriptionally repressive, while the cell's interior is considered a transcriptionally active area. 
Topologically Associated Domains (TADs)
The 3-dimensional positioning of chromatin in the nucleus influences the...
24.8K