Deleterious mitochondrial DNA point mutations are overrepresented in Drosophila expressing a proofreading-defective

Colby L Samstag1,2, Jake G Hoekstra3, Chiu-Hui Huang4

  • 1Molecular and Cellular Biology Program, University of Washington, Seattle, WA, United States of America.

Plos Genetics
|November 20, 2018
PubMed

Insights

Mitochondrial DNA (mtDNA) mutations accelerate aging and disease. This study reveals a positive selection mechanism favoring harmful mtDNA variants, impacting lifespan and neuronal health in Drosophila.

Area of Science:

  • Genetics
  • Molecular Biology
  • Neuroscience

Background:

  • Mitochondrial DNA (mtDNA) mutations are linked to inherited syndromes, aging, and common diseases.
  • The mechanisms governing mtDNA mutation frequency and pathogenicity remain largely unknown.
  • Understanding these mechanisms is crucial for addressing age-related and inherited conditions.

Purpose of the Study:

  • To investigate the mechanisms influencing the frequency and pathogenicity of mtDNA mutations.
  • To create and characterize a Drosophila model with increased somatic mtDNA mutation rates.
  • To explore the selective pressures acting on mtDNA variants.

Main Methods:

  • Generation of a Drosophila mtDNA mutator strain expressing a proofreading-deficient mitochondrial DNA polymerase.
  • Quantification of somatic mtDNA mutation frequency in relation to polymerase dosage.
  • Assessment of physiological and neurological phenotypes, including lifespan and dopaminergic neuron integrity.

Main Results:

  • Mutator flies displayed a significantly increased somatic mtDNA mutation frequency, correlated with polymerase dosage.
  • Observed mitochondrial dysfunction, shortened lifespan, locomotor deficits, and loss of dopaminergic neurons.
  • Pathogenic and conserved-site mtDNA mutations were overrepresented, contradicting neutral mutation models.

Conclusions:

  • A positive selection mechanism favors deleterious mtDNA variants, exceeding neutral predictions.
  • Deleterious mtDNA mutations may be overrepresented due to evasion of quality control or amplification via compensatory mitochondrial biogenesis.
  • These findings provide novel insights into mtDNA mutation dynamics and their role in aging and disease.

Related Concept Videos

Translesion DNA Polymerases02:10

Translesion DNA Polymerases

Translesion (TLS) polymerases rescue stalled DNA polymerases at sites of damaged bases by replacing the replicative polymerase and installing a nucleotide across the damaged site. Doing so, TLS allows additional time for the cell to repair the damage before resuming regular DNA replication.
TLS polymerases are found in all three domains of life - archaea, bacteria, and eukaryotes. Of the different classes of TLS polymerases, members of the Y family are fitted with specialized structures that...
11.2K
Proofreading01:43

Proofreading

Overview
60.9K
Overview of DNA Repair02:25

Overview of DNA Repair

In order to be passed through generations, genomic DNA must be undamaged and error-free. However, every day, DNA in a cell undergoes several thousand to a million damaging events by natural causes and external factors. Ionizing radiation such as UV rays, free radicals produced during cellular respiration, and hydrolytic damage from metabolic reactions can alter the structure of DNA. Damages caused include single-base alteration, base dimerization, chain breaks, and cross-linkage.
Chemically...
33.7K
DNA-only Transposons02:57

DNA-only Transposons

DNA-only transposons are called autonomous transposons since they code for the enzyme transposase that is required for the transposition mechanism. Insertion of transposons can alter gene functions in multiple ways. They can mutate the gene, alter gene expression by introducing a novel promoter or insulator sequence, introduce new splice sites, and change the mRNA transcripts produced, or remodel chromatin structure.
The donor site from where the transposon is excised is either degraded or...
17.5K
DNA Replication02:40

DNA Replication

DNA replication involves the separation of the two strands of the double helix, with each strand serving as a template from which the new complementary strand is copied.  After replication, each double-stranded DNA includes one parental or “old” strand and one “new” strand. This is known as semiconservative replication. The resulting DNA molecules have the same sequence and are divided equally into the two daughter cells.
Replication in Prokaryotes
DNA replication...
59.3K
Complementary DNA01:44

Complementary DNA

Overview
31.6K