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Updated: Feb 2, 2026

Murine Model of Leukemia Relapse to Induction Chemotherapy for Acute Lymphoblastic Leukemia
Published on: October 17, 2025
NPM1 mutated AML can relapse with wild-type NPM1: persistent clonal hematopoiesis can drive relapse
Alexander Höllein1, Manja Meggendorfer1, Frank Dicker1
1MLL Munich Leukemia Laboratory, Munich, Germany.
Abstract:
Acute myeloid leukemia (AML) with NPM1 mutation (NPM1 mut) defines a World Health Organization entity. Absence of minimal residual disease (MRD) following induction chemotherapy is associated with an excellent prognosis. Data are conflicting on NPM1 mut AML relapsing with wild-type NPM1 (NPM1 wt ). We analyzed 104 paired samples of NPM1 mut AML patients with relapse and identified 14/104 that relapsed with NPM1 wt AML. Blood counts at diagnosis differed significantly between patients with NPM1 mut and NPM1 wt relapse (median white blood cell count, 30 vs 3 × 109/L, P = .008; platelet count, 66 vs 128 × 109/l, P = .018). NPM1 mut relapse occurred significantly earlier than NPM1 wt relapse (14 vs 43 months, P = .004). At diagnosis, FLT3-ITD were more frequent in patients with NPM1 mut relapse (P = .029), whereas DNMT3A mutations were more frequent in patients with NPM1 relapse (P = .035). Sequencing analysis of paired samples at diagnosis, molecular remission, and NPM1 wt relapse identified cooccurring mutations that persist from diagnosis throughout remission and at relapse, suggestive of a preexisting clonal hematopoiesis. We provide evidence that AML relapsing with NPM1 wt is a distinct disease and that initial leukemia and relapse potentially arise from a premalignant clonal hematopoiesis.
Insights
Acute myeloid leukemia (AML) with NPM1 mutation that relapses with wild-type NPM1 is a distinct disease. This suggests a pre-existing clonal hematopoiesis may drive both initial leukemia and relapse in NPM1-mutated AML.
Area of Science:
- Hematology
- Molecular Oncology
- Genetics
Background:
- Acute myeloid leukemia (AML) with NPM1 mutation (NPM1mut) is a distinct WHO entity.
- Absence of minimal residual disease (MRD) post-chemotherapy indicates a good prognosis.
- Conflicting data exist regarding NPM1mut AML relapsing with wild-type NPM1 (NPM1wt).
Purpose of the Study:
- To investigate the characteristics of NPM1mut AML relapsing with NPM1wt.
- To determine if NPM1wt relapse represents a distinct clinical and molecular entity.
- To explore the potential role of pre-existing clonal hematopoiesis.
Main Methods:
- Analysis of 104 paired samples from NPM1mut AML patients with relapse.
- Comparison of clinical and molecular features between NPM1mut and NPM1wt relapse groups.
- Sequencing of paired samples at diagnosis, remission, and relapse.
Main Results:
- 14 out of 104 patients relapsed with NPM1wt AML.
- Significant differences in blood counts (WBC, platelets) and relapse timing between NPM1mut and NPM1wt relapse.
- FLT3-ITD mutations were more frequent in NPM1mut relapse, while DNMT3A mutations were more frequent in NPM1wt relapse.
- Co-occurring mutations persisted from diagnosis through remission to relapse, suggesting clonal hematopoiesis.
Conclusions:
- AML relapsing with NPM1wt is a distinct disease entity.
- Initial leukemia and relapse may originate from pre-malignant clonal hematopoiesis.
- Understanding these distinct relapse patterns can inform future therapeutic strategies.
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