Ternary crystal structure of human RORγ ligand-binding-domain, an inhibitor and corepressor peptide provides a new

Masato Noguchi1, Akihiro Nomura2, Satoki Doi2

  • 1Pharmaceutical Frontier Research Laboratories, Central Pharmaceutical Research Institute, Japan Tobacco Inc., 1-13-2, Fukuura, Kanazawa-Ku, Yokohama, Kanagawa, 236-0004, Japan. masato.noguchi@jt.com.

Scientific Reports
|November 28, 2018
PubMed

Insights

We determined the crystal structure of a novel Retinoic acid-related orphan receptor gamma (RORγ) inhibitor, compound T, bound to RORγ and a corepressor peptide. This reveals a unique inhibitory mechanism distinct from inverse agonists, aiding autoimmune disease drug development.

Area of Science:

  • Structural biology
  • Immunology
  • Pharmacology

Background:

  • Retinoic acid-related orphan receptor gamma (RORγ) is a key regulator of T helper 17 (Th17) cells, which are implicated in autoimmune diseases.
  • Inhibitors targeting the RORγ ligand binding domain (LBD) are promising therapeutic agents for autoimmune disorders.
  • Structure-based drug design has successfully identified RORγ inhibitors.

Purpose of the Study:

  • To elucidate the structural basis of a novel RORγ inhibitor, compound T, in complex with RORγ-LBD and a corepressor peptide.
  • To understand the mechanism of action of compound T and compare it with previously identified inverse agonists.
  • To provide insights for the development of new drugs targeting RORγ for autoimmune diseases.

Main Methods:

  • X-ray crystallography was used to determine the co-complex structure of RORγ-LBD, compound T, and a corepressor peptide.
  • Structural analysis focused on conformational changes induced by compound T binding.
  • Comparison of the ternary complex structure with previously reported RORγ-inverse agonist complexes.

Main Results:

  • The crystal structure of the ternary complex revealed a novel inhibitory mechanism mediated by compound T.
  • Compound T induced a ~2 Å shift in helix 5 (H5) backbone and conformational changes in Met365.
  • These structural alterations led to reduced binding of the corepressor peptide to RORγ-LBD, suggesting H5 shift is critical for inhibition.

Conclusions:

  • The novel RORγ inhibitor compound T employs a distinct mechanism of action compared to inverse agonists.
  • The observed conformational changes, particularly the H5 shift, are crucial for the inhibitory effect.
  • This structural understanding provides a foundation for designing more effective RORγ-targeted therapies for autoimmune conditions.

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