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Updated: Feb 1, 2026

Incorporating Target Protein Structure Flexibility and Dynamics in Computational Drug Discovery Using Ensemble-Based Docking Analysis
Published on: June 20, 2025
Binding of β-carotene to whey proteins: Multi-spectroscopic techniques and docking studies
Zahra Allahdad1, Mehdi Varidi1, Reza Zadmard2
1Department of Food Science and Technology, College of Agriculture, Ferdowsi University of Mashhad, Mashhad, Iran.
Abstract:
The objective of this work was to study molecular binding between β-carotene (β-C) and whey protein isolate (WPI) as a function of pH (4-9), temperature (15, 25, and 35 °C), and NaCl concentration (0-0.25 M) using spectroscopic techniques and docking studies. The fluorescence quenching data showed that binding affinity increased with pH, temperature and ionic strength. The binding was entropy driven and involved mostly hydrophobic interactions. Three major whey proteins including β-lactoglobulin (β-Lg), α-lactalbumin (α-Lac), and bovine serum albumin (BSA) were bound to β-C with overall binding constant values of 1.31 × 107, 1.80 × 104, and 4.51 × 104 M-1, respectively. A single class of binding sites for β-C on whey fractions was recognized using Job's method. Docking results revealed β-C was bound to the subdomain IIA of BSA, the residues of aromatic cluster II in α-lactalbumin and into the calyx of β-lactoglobulin resulting in conformational changes in the secondary and tertiary structures of proteins.
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