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Updated: Feb 1, 2026

Detection of Targetable Alterations in Non-small Cell Lung Cancer using Next-generation Sequencing
Published on: October 10, 2025
Identification and validation of NOLC1 as a potential target for enhancing sensitivity in multidrug resistant
Huaping Huang1, Tangying Li2, Mingjing Chen3
11Department of Respiratory Diseases, The First Affiliated Hospital of Hainan Medical University, Haikou, 570102 Hainan China.
Abstract:
Adjuvant chemotherapy has become the frequently adopted standard therapeutic approach for non-small cell lung cancer (NSCLC). However, the development of multidrug resistance (MDR) is a major obstacle contributing to the failure of chemotherapy. This study aimed to identify genes associated with MDR development that predict tumor response to chemotherapy in NSCLC. In the present study, a multidrug-resistant NSCLC cell sub-line, A549/MDR, was established from the A549/DDP cell line and characterized. The resistance index (RI) of this subline was calculated according to the IC50 of A549/MDR relative to the parental A549/DDP cells. The gene expression profiles of A549/DDP and A549/MDR were obtained using an oligonucleotide microarray (Agilent SureHyb microarray chip). The microarray results were validated by qRT-PCR and selected genes were analyzed by in vitro loss-of-function experiments. Gene expression profiling identified 921 differentially expressed genes (DEGs) according to the selection criteria, in which 541 genes were upregulated and 380 genes were downregulated in A549/MDR compared with A549/DDP cells. We found that these DEGs are involved in diverse biological processes, including ribonucleoprotein complex, drug metabolism, the Hippo signaling pathway and transcriptional misregulation. NOLC1, as one of the identified DEGs, was confirmed to be overexpressed in A549/MDR cells and its knockdown significantly enhanced the drug sensitivity of A549/MDR cells in response to multidrug treatment. Furthermore, knockdown of NOLC1 downregulated the expression levels of drug resistance-associated molecules (LRP and MDR1) in A549/MDR cells. These findings provide a new and comprehensive expression profile of MDR in NSCLC cells. Identification and validation of NOLC1 might be a promising therapeutic strategy for the management of MDR of NSCLC patients.
Insights
Multidrug resistance (MDR) hinders chemotherapy for non-small cell lung cancer (NSCLC). Researchers identified NOLC1 gene overexpression in resistant NSCLC cells, and its knockdown improved drug sensitivity, suggesting NOLC1 as a potential therapeutic target.
Area of Science:
- Oncology
- Molecular Biology
- Genetics
Background:
- Adjuvant chemotherapy is standard for non-small cell lung cancer (NSCLC).
- Multidrug resistance (MDR) significantly impedes chemotherapy efficacy in NSCLC.
- Identifying genes driving MDR is crucial for improving treatment outcomes.
Purpose of the Study:
- To identify genes associated with MDR development in NSCLC.
- To investigate the role of identified genes in predicting tumor response to chemotherapy.
- To explore potential therapeutic targets for overcoming MDR in NSCLC.
Main Methods:
- Established and characterized a multidrug-resistant NSCLC cell sub-line (A549/MDR).
- Utilized oligonucleotide microarrays for gene expression profiling.
- Validated microarray findings using qRT-PCR and in vitro loss-of-function experiments.
Main Results:
- Identified 921 differentially expressed genes (DEGs) between resistant and sensitive NSCLC cells.
- Found DEGs involved in drug metabolism, Hippo signaling, and transcriptional regulation.
- Confirmed NOLC1 overexpression in resistant cells; its knockdown restored drug sensitivity and reduced MDR markers (LRP, MDR1).
Conclusions:
- NOLC1 is a key gene implicated in MDR development in NSCLC.
- NOLC1 knockdown demonstrates potential for enhancing chemotherapy response in NSCLC.
- Targeting NOLC1 represents a promising therapeutic strategy for managing MDR in NSCLC patients.
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