Related Experiment Video
Updated: Feb 1, 2026

05:13
Rapid Detection of Helicobacter pylori Virulence and Typing Using Quantum Dot Labeling Technology
Published on: June 13, 2025
760
Role of a Stem-Loop Structure in Helicobacter pylori cagA Transcript Stability
John T Loh1, Aung Soe Lin2, Amber C Beckett2
1Department of Medicine, Vanderbilt University School of Medicine, Nashville, Tennessee, USA.
Infection and Immunity
|December 5, 2018
Summary
The Helicobacter pylori CagA protein
Area of Science:
- Microbiology
- Molecular Biology
- Oncology
Background:
- Helicobacter pylori CagA protein contributes to gastric cancer.
- Strain-specific variations in CagA levels correlate with premalignant gastric histology.
- A +59 motif and adjacent stem-loop structure in the cagA 5' UTR are implicated in CagA regulation.
Purpose of the Study:
- To investigate the impact of the +59 motif and adjacent stem-loop on cagA transcript levels and mRNA stability.
- To elucidate the regulatory mechanisms controlling CagA expression in H. pylori.
Main Methods:
- Site-directed mutagenesis was employed to alter the +59 motif and stem-loop structure.
- Analysis of cagA transcript levels and CagA protein expression.
- Determination of cagA mRNA half-life.
Main Results:
- Disruption of the stem-loop structure led to decreased cagA transcript and CagA protein levels, along with reduced mRNA stability.
- Mutating the +59 motif alone reduced transcript and protein levels but did not affect mRNA stability.
- Increased NaCl concentrations did not alter cagA transcript stability.
Conclusions:
- Both the stem-loop structure and the +59 motif in the cagA 5' UTR are critical for regulating cagA expression levels.
- These findings provide insights into the molecular mechanisms underlying H. pylori-associated gastric carcinogenesis.
- Understanding these regulatory elements could inform therapeutic strategies targeting H. pylori infections.
Related Concept Videos
Treating Helicobacter pylori in Peptic Ulcers: Antimicrobial Therapy
1.3K
Helicobacter pylori, a resilient gram-negative bacterium, can thrive in the stomach's harsh, acidic environment. Infection with H. pylori leads to a cascade of events within the stomach lining. One of the critical disruptions caused by this bacterium is the interference with somatostatin production, a hormone responsible for regulating acid secretion. This interference tips the balance, escalating acid secretion and diminishing bicarbonate levels. This imbalance compromises the defensive...
1.3K
Stability of structures
525
In mechanical engineering, the stability of systems under various forces is critical for designing durable and efficient structures. One fundamental way to explore these concepts is by analyzing systems like two rods connected at a pivot point, O, with a torsional spring of spring constant k at the pivot point. This system is similar in appearance to a scissor jack used to change tires on a car. In this case, the arms of the linkage (equivalent to the rods in this system) are entirely vertical,...
525
RNA Stability
35.7K
Intact DNA strands can be found in fossils, while scientists sometimes struggle to keep RNA intact under laboratory conditions. The structural variations between RNA and DNA underlie the differences in their stability and longevity. Because DNA is double-stranded, it is inherently more stable. The single-stranded structure of RNA is less stable but also more flexible and can form weak internal bonds. Additionally, most RNAs in the cell are relatively short, while DNA can be up to 250 million...
35.7K
Master Transcription Regulators
7.8K
Master transcription regulators are regulatory proteins that are predominantly responsible for regulating the expression of multiple genes. Often these genes work in concert to drive a complex process. Activation of a master transcription regulator can lead to a cascade of transcriptional activation necessary for that outcome. These regulators can directly bind to the regulatory sequences of the various genes involved, or they can indirectly regulate transcription by binding to regulatory...
7.8K
Transcription Factors
82.7K
Tissue-specific transcription factors contribute to diverse cellular functions in mammals. For example, the gene for beta globin, a major component of hemoglobin, is present in all cells of the body. However, it is only expressed in red blood cells because the transcription factors that can bind to the promoter sequences of the beta globin gene are only expressed in these cells. Tissue-specific transcription factors also ensure that mutations in these factors may impair only the function of...
82.7K
mRNA Stability and Gene Expression
6.6K
The structure and stability of mRNA molecules regulates gene expression, as mRNAs are a key step in the pathway from gene to protein. In eukaryotes, the half-life of mRNA varies from a few minutes up to several days. mRNA stability is essential in growth and development. The absence of the proteins regulating its stability, such as tristetraprolin in mice, can cause systemic issues, including bone marrow overgrowth, inflammation, and autoimmunity.
Cis-acting Elements involved in mRNA stability
Cis-acting Elements involved in mRNA stability
6.6K

