From nodes to networks: How methods for defining nodes influence inferences regarding network interactions
Dimitri Falco1, Asadur Chowdury2, David R Rosenberg2
1Center for Complex Systems and Brain Sciences, Florida Atlantic University, Boca Raton, Florida.
Human Brain Mapping
|December 12, 2018
Summary
Comparing brain imaging analysis methods for working memory, this study found that while Activation Likelihood Estimate (ALE) summarizes network locations, Experimentally Derived Estimate (EDE) offers better individual brain connectivity insights. A hybrid approach is recommended.
Area of Science:
- Neuroimaging
- Cognitive Neuroscience
- Brain Connectivity Analysis
Background:
- Functional connectivity (FC) analysis in fMRI relies on identifying network nodes from activation patterns.
- Existing methods like Activation Likelihood Estimate (ALE) identify canonical activation maxima.
- Experimentally Derived Estimates (EDE) use individual participant data for activation maxima.
Purpose of the Study:
- To compare ALE and EDE approaches for network node identification in working memory tasks.
- To evaluate their effectiveness in functional inference and connectivity analysis.
- To determine the optimal method for individualized network inference.
Main Methods:
- Localized network nodes using both ALE and EDE for each participant in verbal and visual working memory tasks.
- Extracted time series from identified nodes.
- Compared nodal time series and network edge correlations between ALE and EDE methods.
Main Results:
- Significant differences were observed in a large proportion of network edge correlations between ALE and EDE methods.
- ALE effectively summarizes working memory network node locations across studies and subjects.
- EDE methods demonstrated sensitivity to individual functional loci, providing individualized connectivity estimates.
Conclusions:
- ALE provides a generalized summary of working memory network nodes.
- EDE offers superior individualized estimates of functional connectivity.
- A hybrid approach combining ALE and EDE is proposed as optimal for robust network inference.
Related Concept Videos
Protein Networks
4.5K
An organism can have thousands of different proteins, and these proteins must cooperate to ensure the health of an organism. Proteins bind to other proteins and form complexes to carry out their functions. Many proteins interact with multiple other proteins creating a complex network of protein interactions.
These interactions can be represented through maps depicting protein-protein interaction networks, represented as nodes and edges. Nodes are circles that are representative of a protein,...
These interactions can be represented through maps depicting protein-protein interaction networks, represented as nodes and edges. Nodes are circles that are representative of a protein,...
4.5K
Protein Networks
2.9K
2.9K
Network Covalent Solids
16.2K
Network covalent solids contain a three-dimensional network of covalently bonded atoms as found in the crystal structures of nonmetals like diamond, graphite, silicon, and some covalent compounds, such as silicon dioxide (sand) and silicon carbide (carborundum, the abrasive on sandpaper). Many minerals have networks of covalent bonds.
To break or to melt a covalent network solid, covalent bonds must be broken. Because covalent bonds are relatively strong, covalent network solids are typically...
To break or to melt a covalent network solid, covalent bonds must be broken. Because covalent bonds are relatively strong, covalent network solids are typically...
16.2K
Node Analysis for AC Circuits
678
Consider an angioplasty system featuring a catheter equipped with a turbine, a critical tool for removing plaque deposits from coronary arteries. This intricate medical device operates using a circuit model reminiscent of a dual-node RLC circuit powered by a current-controlled voltage source.
To unravel the complexities of this system, nodal analysis is employed, a powerful technique founded on Kirchhoff's current law (KCL), which remains valid for phasors. AC circuits can effectively be...
To unravel the complexities of this system, nodal analysis is employed, a powerful technique founded on Kirchhoff's current law (KCL), which remains valid for phasors. AC circuits can effectively be...
678
Network Function of a Circuit
704
Frequency response analysis in electrical circuits provides vital insights into a circuit's behavior as the frequency of the input signal changes. The transfer function, a mathematical tool, is instrumental in understanding this behavior. It defines the relationship between phasor output and input and comes in four types: voltage gain, current gain, transfer impedance, and transfer admittance. The critical components of the transfer function are the poles and zeros.
704
Detailed Structure and Function of Lymph Nodes
4.8K
Lymph nodes are bean-shaped structures that cluster along the lymphatic vessels in the inguinal, axillary, and cervical regions. Each node is divided into compartments by a capsule that extends trabeculae inward.
From a histological perspective, lymph nodes can be split into two main areas: the superficial cortex and the deep medulla. The outer cortex is populated by dendritic cells, macrophages, and B lymphocytes, which are densely packed into follicles. When these B-lymphocytes are presented...
From a histological perspective, lymph nodes can be split into two main areas: the superficial cortex and the deep medulla. The outer cortex is populated by dendritic cells, macrophages, and B lymphocytes, which are densely packed into follicles. When these B-lymphocytes are presented...
4.8K


