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Next Generation Sequencing for the Detection of Actionable Mutations in Solid and Liquid Tumors
Published on: September 20, 2016
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Multicenter experience with large panel next-generation sequencing in patients with advanced solid cancers in Japan
Shingo Kato1,2, Takuo Hayashi3, Yoshiyuki Suehara4
1Department of Clinical Cancer Genomics, Yokohama City University Hospital, Yokohama, Japan.
Japanese Journal of Clinical Oncology
|December 13, 2018
Summary
Next-generation sequencing (NGS) tumor profiling using MSK-IMPACT in Japan showed a 94.1% success rate. While 25% of patients had actionable alterations, clinical trial enrollment was challenging, highlighting the need for system integration.
Area of Science:
- Oncology
- Genomics
- Precision Medicine
Background:
- Next-generation sequencing (NGS) is increasingly used in clinical oncology globally.
- Japan is establishing systems for routine NGS application in clinical practice.
- The Memorial Sloan Kettering-Integrated Mutation Profiling of Actionable Cancer Targets (MSK-IMPACT) assay was introduced in Japan.
Purpose of the Study:
- To report the initial experience of implementing MSK-IMPACT in Japan.
- To assess the feasibility and utility of tumor profiling in Japanese cancer patients.
- To identify challenges and opportunities for precision medicine in Japan.
Main Methods:
- MSK-IMPACT assay was used for tumor profiling.
- Data from 68 patients across two Japanese institutions were analyzed.
- The study period was from June 2016 to October 2017.
Main Results:
- The MSK-IMPACT assay achieved a 94.1% success rate (64/68 patients).
- Common cancer types included endometrial, pancreatic, and colorectal cancers.
- 25% of patients had actionable genetic alterations, but clinical trial enrollment was difficult due to organ-specific limitations.
- One patient with microsatellite instability-high status responded to pembrolizumab.
Conclusions:
- NGS tumor profiling and genomically matched therapy show promise for precision medicine in Japan.
- High costs and system integration challenges need to be addressed for widespread adoption.
- Sharing initial experiences is crucial for advancing precision medicine in the Japanese healthcare system.
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