Related Experiment Video
Updated: Feb 1, 2026

Studying Age-dependent Genomic Instability using the S. cerevisiae Chronological Lifespan Model
Published on: September 29, 2011
The Antitumor Drugs Trabectedin and Lurbinectedin Induce Transcription-Dependent Replication Stress and Genome
Emanuela Tumini1, Emilia Herrera-Moyano1, Marta San Martín-Alonso1
1Centro Andaluz de Biología Molecular y Medicina Regenerativa-CABIMER, CSIC-Universidad Pablo de Olavide-Universidad de Sevilla, Seville, Spain.
Abstract:
R-loops are a major source of replication stress, DNA damage, and genome instability, which are major hallmarks of cancer cells. Accordingly, growing evidence suggests that R-loops may also be related to cancer. Here we show that R-loops play an important role in the cellular response to trabectedin (ET743), an anticancer drug from marine origin and its derivative lurbinectedin (PM01183). Trabectedin and lurbinectedin induced RNA-DNA hybrid-dependent DNA damage in HeLa cells, causing replication impairment and genome instability. We also show that high levels of R-loops increase cell sensitivity to trabectedin. In addition, trabectedin led to transcription-dependent FANCD2 foci accumulation, which was suppressed by RNase H1 overexpression. In yeast, trabectedin and lurbinectedin increased the presence of Rad52 foci, a marker of DNA damage, in an R-loop-dependent manner. In addition to providing new insights into the mechanisms of action of these drugs, our study reveals that R-loops could be targeted by anticancer agents. Given the increasing evidence that R-loops occur all over the genome, the ability of lurbinectedin and trabectedin to act on them may contribute to enhance their efficacy, opening the possibility that R-loops might be a feature shared by specific cancers. IMPLICATIONS: The data presented in this study provide the new concept that R-loops are important cellular factors that contribute to trabectedin and lurbinectedin anticancer activity.
Insights
R-loops contribute to cancer and DNA damage. Anticancer drugs trabectedin and lurbinectedin leverage R-loops to induce DNA damage, enhancing their effectiveness against cancer cells.
Area of Science:
- Molecular Biology
- Cancer Research
- Genetics
Background:
- R-loops, structures of DNA-RNA hybrids, are implicated in replication stress, DNA damage, and genome instability, key features of cancer.
- Growing evidence suggests a link between R-loops and cancer development.
Purpose of the Study:
- To investigate the role of R-loops in the cellular response to anticancer drugs trabectedin and lurbinectedin.
- To explore the potential of targeting R-loops for cancer therapy.
Main Methods:
- Utilized HeLa cells and yeast models to study drug-induced DNA damage and replication impairment.
- Assessed R-loop levels, FANCD2 foci, and Rad52 foci in response to trabectedin and lurbinectedin.
- Investigated the effect of RNase H1 overexpression on drug-induced DNA damage.
Main Results:
- Trabectedin and lurbinectedin induced RNA-DNA hybrid-dependent DNA damage, replication impairment, and genome instability.
- Higher R-loop levels correlated with increased sensitivity to trabectedin.
- Drug-induced DNA damage markers (FANCD2, Rad52 foci) were R-loop-dependent and transcription-dependent.
Conclusions:
- R-loops are crucial cellular factors mediating the anticancer activity of trabectedin and lurbinectedin.
- Targeting R-loops represents a potential therapeutic strategy for cancers, possibly those with specific R-loop features.
Related Concept Videos
Drug Dependence
Chromosome Replication
Transcription Elongation Factors
The transcription elongation is regulated via pausing of RNA polymerase on several occasions during transcription. In bacteria, these halts are necessary because the transcription of DNA into mRNA is coupled to the translation of that mRNA...
Microtubule Instability
Prokaryotic Transcriptional Activators and Repressors
Transcription of prokaryotic...
Transcription Factors

